{"id":"W2087704454","doi":"10.1016/j.tube.2015.02.022","title":"Evolutionary changes in the genome of Mycobacterium tuberculosis and the human genome from 9000 years BP until modern times","year":2015,"lang":"en","type":"article","venue":"Tuberculosis","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"ca_institutions":"Lakehead University","funders":"Rijksinstituut voor Volksgezondheid en Milieu","keywords":"Tuberculosis; Mycobacterium tuberculosis; Mycobacterium tuberculosis complex; Biology; Genome; Population; Ancient DNA; Evolutionary biology; Genetics; Gene; Medicine; Pathology; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006423093,0.0002222815,0.0002775984,0.001197012,0.000807654,0.001130994,0.000256054,0.0009543466,0.002431911],"category_scores_gemma":[0.002913578,0.0002338059,0.0003179589,0.002343991,0.001233883,0.001071032,0.0007482344,0.001353498,0.0004232296],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001260784,"about_ca_system_score_gemma":0.0007429397,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005187488,"about_ca_topic_score_gemma":0.005151095,"domain_scores_codex":[0.9995901,0.0001078117,0.00002968882,0.0001438619,0.00007230195,0.00005625654],"domain_scores_gemma":[0.99923,0.0001692957,0.0002204382,0.00004662916,0.000203121,0.0001305169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.005457119,0.0002550502,0.243378,0.003195973,0.001111041,0.004223824,0.02298965,0.004870719,0.2023968,0.07044885,0.009389427,0.4322837],"study_design_scores_gemma":[0.00005339532,0.0003534334,0.7547377,0.0008650753,0.0002875591,0.003566236,0.00323503,0.0009587517,0.006921649,0.01049004,0.2184552,0.00007594096],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8741324,0.0920535,0.004914219,0.009244015,0.0007311283,0.00002842746,0.002049634,0.0001119624,0.01673472],"genre_scores_gemma":[0.9718466,0.01870396,0.003156777,0.001696807,0.0004108749,0.00001364737,0.001119827,0.00005375959,0.002997705],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005187488,"threshold_uncertainty_score":0.01031458,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03302883095210145,"score_gpt":0.2940317439247086,"score_spread":0.2610029129726071,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}