{"id":"W2088424584","doi":"10.1093/molbev/msj080","title":"Comparative Analysis of Bacterial-Origin Genes for Plant Mitochondrial Ribosomal Proteins","year":2005,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Ribosomal protein; Intron; Genetics; Gene; Ribosome; Nuclear gene; Genome; Ribosomal RNA; Mitochondrial DNA; Group II intron; Mitochondrial ribosome; RNA splicing; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001255417,0.0001360693,0.0002846372,0.0001053387,0.0000758887,0.000006822764,0.0000909114,0.0002283676,0.00001465008],"category_scores_gemma":[0.00003236282,0.0001229672,0.0001471039,0.0001051932,0.0001003465,0.000003935184,0.00003820577,0.00003108351,0.00000144023],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001121217,"about_ca_system_score_gemma":0.00003714831,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001986682,"about_ca_topic_score_gemma":0.00006086895,"domain_scores_codex":[0.9991239,0.0001202079,0.0002139882,0.0003120384,0.00004519569,0.0001846461],"domain_scores_gemma":[0.9995798,0.0000147589,0.0001168949,0.0001767225,0.00006612339,0.00004564085],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004243186,0.0000437351,0.000689538,0.000008050581,0.0005270163,2.443017e-7,0.00003006763,0.0001169313,0.9931984,0.004086178,0.00006657785,0.0008089384],"study_design_scores_gemma":[0.0005210901,0.0004832434,0.001474913,0.000005046694,0.0003092321,0.000003421511,0.00001840259,0.0005422377,0.9823618,0.0005263411,0.01359258,0.0001616855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7974461,0.001292981,0.2004381,0.00007364832,0.0001292413,0.0003777791,0.0001743526,0.000006620052,0.00006110822],"genre_scores_gemma":[0.984003,0.00004454752,0.01468855,0.00003592089,0.0002627938,0.0001182213,0.0007904284,0.00000662869,0.00004987773],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1865569,"threshold_uncertainty_score":0.5014458,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01307801537044314,"score_gpt":0.2785486995805972,"score_spread":0.2654706842101541,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}