{"id":"W2088514905","doi":"10.1046/j.1529-8817.2002.01250.x","title":"CRYPTOMONAD EVOLUTION: NUCLEAR 18S rDNA PHYLOGENY VERSUS CELL MORPHOLOGY AND PIGMENTATION<sup>1</sup>","year":2002,"lang":"en","type":"article","venue":"Journal of Phycology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"","keywords":"Biology; Phylogenetics; Molecular phylogenetics; Genus; Phylogenetic tree; Plastid; Evolutionary biology; Botany; Zoology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001547735,0.0001419406,0.0002219095,0.00009896656,0.0001435198,0.00001508088,0.0002353903,0.0002335235,0.001046632],"category_scores_gemma":[0.00005138998,0.0001445866,0.0001163876,0.00007915872,0.0002069907,0.00001158046,0.0001243938,0.0001987177,0.0000546904],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004100231,"about_ca_system_score_gemma":0.00003736038,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006638425,"about_ca_topic_score_gemma":0.000002996728,"domain_scores_codex":[0.9990193,0.0001361458,0.0002703212,0.0002071369,0.000120383,0.0002467774],"domain_scores_gemma":[0.9992979,0.0000355023,0.0002405089,0.0001576119,0.0001361312,0.0001323735],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002248952,0.0008176722,0.021325,0.00006798103,0.0005712939,0.0003682616,0.000928671,0.0009487068,0.8858798,0.001780443,0.07962625,0.005436935],"study_design_scores_gemma":[0.05117309,0.03557384,0.2182588,0.00006409091,0.001314727,0.00689743,0.00463371,0.002673686,0.09139615,0.004655924,0.5806582,0.002700316],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928511,0.002043349,0.0003028041,0.0003664261,0.0003941676,0.0001016378,0.00001876383,0.000004885602,0.003916866],"genre_scores_gemma":[0.9971911,0.0004786177,0.00113324,0.0004605918,0.0004596246,0.000001730431,0.000007570613,0.0000135999,0.000253917],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7944837,"threshold_uncertainty_score":0.9998665,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01326440626565937,"score_gpt":0.2190659236868716,"score_spread":0.2058015174212122,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}