{"id":"W2088701641","doi":"10.1139/g07-096","title":"Diversity in coffee assessed with SSR markers: structure of the genus <i>Coffea</i> and perspectives for breeding","year":2008,"lang":"en","type":"article","venue":"Genome","topic":"Coffee research and impacts","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Coffea; Biology; Coffea canephora; Microsatellite; Transferability; Genetic diversity; Coffea arabica; Genus; Molecular breeding; Botany; Evolutionary biology; Genetics; Gene; Population","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000959596,0.00008372409,0.0001877625,0.0000793587,0.0002158985,0.000005290595,0.00008662241,0.00003775978,0.00003060369],"category_scores_gemma":[0.0001237307,0.00005186096,0.00003857157,0.000198595,0.0001752229,0.00006856429,0.0001741302,0.0001376203,2.394441e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007895283,"about_ca_system_score_gemma":0.0001431206,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001829443,"about_ca_topic_score_gemma":0.0001303234,"domain_scores_codex":[0.9992991,0.00002339468,0.00007593238,0.0001532508,0.0002192723,0.0002290498],"domain_scores_gemma":[0.9995335,0.00007645373,0.00004003471,0.0001539913,0.00009660012,0.00009945708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00226073,0.0001365428,0.7703956,0.0003569342,0.0001856873,0.00005722363,0.01374044,0.000009415375,0.2115832,0.00007679523,0.0003683322,0.0008291035],"study_design_scores_gemma":[0.002166391,0.0005456588,0.9934436,0.00004726822,0.00002786646,0.0001064117,0.001917102,0.00001950394,0.001238742,0.00004806105,0.0003743277,0.00006505177],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974295,0.0008277306,0.00004352274,0.0006496085,0.00001807862,0.0005260252,0.0000420818,0.00000733757,0.0004561087],"genre_scores_gemma":[0.9992937,0.0001374458,0.0002652072,0.00006156316,0.00005447286,0.000002112623,0.000002776009,0.000008486689,0.0001741836],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2230481,"threshold_uncertainty_score":0.2114829,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04551350679354178,"score_gpt":0.2671134944743416,"score_spread":0.2215999876807998,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}