{"id":"W2088726401","doi":"10.1007/s002510100299","title":"Sequence and peptide-binding motif for a variant of HLA-A*0214 (A*02142) in an HIV-1-resistant individual from the Nairobi Sex Worker cohort","year":2001,"lang":"en","type":"article","venue":"Immunogenetics","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba; Mount Sinai Hospital; University of Toronto","funders":"Ontario HIV Treatment Network","keywords":"Biology; Genetics; Human leukocyte antigen; Peptide; Peptide sequence; Allele; Nucleic acid sequence; Molecular biology; Gene; Virology; Antigen; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001442966,0.0004514236,0.0003129904,0.0009087286,0.001135539,0.0004501705,0.0006152026,0.001076674,0.001949681],"category_scores_gemma":[0.000632428,0.0002580507,0.0003676577,0.0005903156,0.00042418,0.0001759758,0.0002481229,0.0007837744,0.0003699606],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003596997,"about_ca_system_score_gemma":0.0002644435,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02625949,"about_ca_topic_score_gemma":0.01789158,"domain_scores_codex":[0.9998057,0.00003298741,0.0000192727,0.0000466308,0.00003110769,0.00006428708],"domain_scores_gemma":[0.9997194,0.00008100174,0.00005012499,0.00001749184,0.00004106813,0.00009070493],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002041898,0.0006201926,0.829012,0.00004825347,0.0001514547,0.05635264,0.003605985,0.0003432214,0.09994625,0.0002893127,0.0005993676,0.006989437],"study_design_scores_gemma":[0.00004142041,0.0006966293,0.9678892,0.00002121501,0.0001128204,0.02419621,0.002056295,0.0005447196,0.003201916,0.00006893786,0.001144741,0.00002584933],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994823,0.00003327728,0.00004159708,0.00003272196,0.000005319152,0.00000574757,0.00009689391,9.195628e-7,0.0003012432],"genre_scores_gemma":[0.9990579,0.00004172842,0.00007423404,0.00005930918,0.000009196762,0.000005925318,0.0001277724,0.000002978698,0.000620944],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02625949,"threshold_uncertainty_score":0.05221325,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02867269197461395,"score_gpt":0.2589295455544977,"score_spread":0.2302568535798838,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}