{"id":"W2088787602","doi":"10.1007/s00239-003-2577-4","title":"Polymorphic Insertions and Deletions in Parabasalian Enolase Genes","year":2004,"lang":"en","type":"article","venue":"Journal of Molecular Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia","funders":"","keywords":"Biology; Genetics; Phylogenetic tree; Gene; Concerted evolution; Enolase; Phylogenetics; Recombination; Gene conversion; Conserved sequence; Molecular evolution; Evolutionary biology; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001371659,0.00007031456,0.00008516708,0.0001094369,0.00005619554,0.00001057058,0.00008357504,0.00008766078,0.000003032172],"category_scores_gemma":[0.00004617419,0.00007301345,0.0000658041,0.00009729385,0.00005015189,0.000008489618,0.00003663169,0.00007606746,0.000002541907],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004347307,"about_ca_system_score_gemma":0.0001379552,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006029122,"about_ca_topic_score_gemma":0.00006963824,"domain_scores_codex":[0.9994712,0.00004887523,0.0001719056,0.00009781607,0.00009767502,0.0001124656],"domain_scores_gemma":[0.9996652,0.000002409526,0.00009559311,0.00009296638,0.00007438005,0.00006945564],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007169066,0.0001034999,0.02375124,0.000007217051,0.0000329078,0.00006298598,0.00003693319,0.001711529,0.9725742,0.001202584,0.00004148393,0.0004036625],"study_design_scores_gemma":[0.004001133,0.001131695,0.4744002,0.0001224424,0.0001032226,0.001192613,0.0002072871,0.00003394985,0.5072189,0.00868499,0.00250443,0.0003990913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9749062,0.004370514,0.02003068,0.0004984516,0.00006562231,0.00006172886,0.000006566249,0.000001875004,0.00005834448],"genre_scores_gemma":[0.9981748,0.0002476122,0.00136763,0.000124378,0.00005631476,0.000001555416,0.000008495108,0.000005652399,0.00001350243],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4653553,"threshold_uncertainty_score":0.2977402,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005804113085383762,"score_gpt":0.2107333775221661,"score_spread":0.2049292644367823,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}