{"id":"W2088868966","doi":"10.1007/s00425-006-0296-y","title":"Multiple cis-regulatory elements regulate distinct and complex patterns of developmental and wound-induced expression of Arabidopsis thaliana 4CL gene family members","year":2006,"lang":"en","type":"article","venue":"Planta","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Arabidopsis; Arabidopsis thaliana; Gene; Biology; Gene family; Phenylpropanoid; Gene expression; Reporter gene; Regulation of gene expression; GUS reporter system; Promoter; Genetics; Cell biology; Biosynthesis; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001301494,0.0001770781,0.0002691824,0.00007316141,0.00006263689,0.00001063731,0.000129803,0.00009559638,0.00002359333],"category_scores_gemma":[0.00001699486,0.0001600524,0.00005368288,0.00004911959,0.00005557626,0.000006223557,0.0001820931,0.00004310211,6.572551e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001119221,"about_ca_system_score_gemma":0.0000240687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003464321,"about_ca_topic_score_gemma":0.0002384944,"domain_scores_codex":[0.9988194,0.0000555446,0.0003955486,0.0003428582,0.0002042002,0.0001824515],"domain_scores_gemma":[0.9994167,0.00002318221,0.0002403682,0.0002111851,0.00003613224,0.00007243856],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001027752,0.00004374824,0.1894525,0.00003741434,0.0000533444,0.000003491937,0.00002631235,0.000009268663,0.8080074,0.000001169962,0.00203002,0.0002325949],"study_design_scores_gemma":[0.0006322839,0.00003395819,0.2716739,0.00004270639,0.00003095708,0.00001769672,0.00008807058,0.0001806225,0.7262322,0.000004344101,0.0009188719,0.0001442801],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988745,0.0001343676,0.0001120566,0.000009117085,0.00003449442,0.0001216676,0.0004311814,0.000006865606,0.0002757124],"genre_scores_gemma":[0.9971537,0.00007186182,0.001417802,0.00002999161,0.0000303513,0.000005896075,0.001062289,0.00001514821,0.0002129701],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08222145,"threshold_uncertainty_score":0.6526749,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01655532577424626,"score_gpt":0.2306794845878966,"score_spread":0.2141241588136503,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}