{"id":"W2089073782","doi":"10.1007/s705-002-8325-0","title":"Genomic variability in Potato potyvirus Y (PVY): evidence that PVY N W and PVY NTN variants are single to multiple recombinants between PVY O and PVY N isolates","year":2002,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":242,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Institut National de la Recherche Agronomique; Canadian Food Inspection Agency","keywords":"Potato virus Y; Biology; Potyvirus; Potyviridae; Virology; Genetics; Genome; Gene; Restriction fragment length polymorphism; Recombination; Whole genome sequencing; Genotype; Virus; Plant virus","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006213186,0.000286937,0.0006455947,0.00008978196,0.000255122,0.00004641324,0.0004736404,0.0001382953,0.00009247725],"category_scores_gemma":[0.001442208,0.0001472813,0.00006785328,0.0002318166,0.0005481109,0.0001942168,0.0007745984,0.0002946752,0.0000242733],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002563917,"about_ca_system_score_gemma":0.000007533591,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00143427,"about_ca_topic_score_gemma":0.002901234,"domain_scores_codex":[0.997204,0.000687441,0.0004265971,0.0007786171,0.0001765646,0.0007267963],"domain_scores_gemma":[0.9937689,0.005591759,0.0002075505,0.0001644865,0.00002497112,0.0002422792],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001955245,0.0001606262,0.5371034,0.0000280991,0.00003797964,0.00001439562,0.0007242538,0.000003310636,0.4326105,0.000013075,0.0001608433,0.02894807],"study_design_scores_gemma":[0.0004035305,0.0009326736,0.9914225,0.000102361,0.00001730144,0.00003261375,0.0001554232,0.0005465362,0.003336232,0.002213852,0.0005780667,0.0002588843],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942145,0.001709641,0.00001543964,0.002836829,0.00005524258,0.000505132,0.0003991975,0.00003240677,0.0002316363],"genre_scores_gemma":[0.9966868,0.002500343,0.0004216699,0.0002030422,0.0000602238,0.00002940271,0.00001357535,0.00000336482,0.00008160264],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4543191,"threshold_uncertainty_score":0.6005959,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08484875932389963,"score_gpt":0.2574780267213514,"score_spread":0.1726292673974518,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}