{"id":"W2089144317","doi":"10.4161/epi.5.1.10436","title":"Cell culture-induced aberrant methylation of the imprinted IG DMR in human lymphoblastoid cell lines","year":2010,"lang":"en","type":"article","venue":"Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Division of Materials Research; Canadian Institutes of Health Research; Genome Canada; McGill University","keywords":"Biology; Methylation; DNA methylation; Epigenetics; Molecular biology; Genomic imprinting; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003152466,0.0001970943,0.0001860069,0.00006474547,0.00009461828,0.00001796798,0.0003451298,0.0003359489,0.00001789439],"category_scores_gemma":[0.0000872979,0.0001639723,0.0001362126,0.0002018289,0.00007977225,0.000003018581,0.0001516676,0.0002227515,0.000004154842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001378805,"about_ca_system_score_gemma":0.00009014594,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000959805,"about_ca_topic_score_gemma":0.0005524951,"domain_scores_codex":[0.9986276,0.0001071098,0.0004632087,0.0003464275,0.0002056931,0.0002499301],"domain_scores_gemma":[0.9988341,0.00001795137,0.0002566264,0.0006463113,0.0001765144,0.00006850706],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000117926,0.000124294,0.009470887,0.00002268729,0.000006909582,3.351638e-7,0.000204679,0.0004897232,0.9888299,0.00002436089,0.00003022008,0.0007842153],"study_design_scores_gemma":[0.000612721,0.0001774985,0.03491102,0.000008378954,0.00001721048,4.966304e-7,0.00004423956,0.0002812009,0.9596428,0.0003065046,0.00380701,0.0001909223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952636,0.0008779598,0.0009392635,0.00005138612,0.000480314,0.0002894162,0.00001246934,0.000007558268,0.002077975],"genre_scores_gemma":[0.9972697,0.0002315666,0.001499783,0.00003563029,0.0002156734,0.00001303515,0.00004919776,0.00003319823,0.0006522505],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0291871,"threshold_uncertainty_score":0.6686596,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009098713326812415,"score_gpt":0.2556085786338601,"score_spread":0.2465098653070476,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}