{"id":"W2089342315","doi":"10.1016/j.molbiopara.2005.12.009","title":"Expression profiling by whole-genome interspecies microarray hybridization reveals differential gene expression in procyclic promastigotes, lesion-derived amastigotes, and axenic amastigotes in Leishmania mexicana","year":2006,"lang":"en","type":"article","venue":"Molecular and Biochemical Parasitology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":158,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Wellcome Trust; Purdue University","keywords":"Biology; Amastigote; DNA microarray; Axenic; Leishmania mexicana; Gene expression profiling; Gene; Gene expression; Transcriptome; Leishmania; Genome; Microarray; Genetics; Molecular biology; Parasite hosting","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008175404,0.0001856692,0.0002638907,0.0002472041,0.0002474423,0.000326334,0.0001327501,0.0002422816,0.0007015367],"category_scores_gemma":[0.0001052376,0.0001568966,0.0002426003,0.0002463958,0.0002020959,0.0001680673,0.0001529266,0.0005173193,0.0002343084],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002077519,"about_ca_system_score_gemma":0.0001115535,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001112264,"about_ca_topic_score_gemma":0.001435143,"domain_scores_codex":[0.9999031,0.00000834187,0.000004183833,0.0000329212,0.00001866375,0.0000328058],"domain_scores_gemma":[0.9999418,0.00001459937,0.00001324044,0.000006494924,0.0000118404,0.00001202839],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001311365,0.000009227991,0.0004859754,0.0000126483,0.000003000659,0.00001220602,0.00002075213,0.00002338995,0.9986583,0.00003208921,0.00002831175,0.0005829417],"study_design_scores_gemma":[0.00005028412,0.0005315063,0.2834191,0.000009989845,0.00008148511,0.0004526845,0.000420276,0.002324003,0.7086495,0.0001947399,0.003846123,0.00002038698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965394,0.000538471,0.0009657526,0.0001034707,0.00001105745,0.000008810129,0.001064835,0.00003065936,0.000737566],"genre_scores_gemma":[0.9922421,0.00050854,0.00148137,0.0001148847,0.00001796717,0.000045335,0.002700955,0.0000226727,0.002866178],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001112264,"threshold_uncertainty_score":0.002346933,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01179554720912764,"score_gpt":0.2744385748696263,"score_spread":0.2626430276604987,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}