{"id":"W2090127580","doi":"10.1038/ismej.2007.65","title":"Stable-isotope probing implicates <i>Methylophaga</i> spp and novel <i>Gammaproteobacteria</i> in marine methanol and methylamine metabolism","year":2007,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":196,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"Natural Environment Research Council; Natural Sciences and Engineering Research Council of Canada; Society for General Microbiology","keywords":"Biology; Stable-isotope probing; Gammaproteobacteria; Methylamine; Methanol dehydrogenase; Temperature gradient gel electrophoresis; 16S ribosomal RNA; Biochemistry; Bacteria; Gene; Microorganism; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002708394,0.0005104005,0.0002817645,0.0003613276,0.0002522074,0.0005060384,0.0002513375,0.0005574357,0.000626679],"category_scores_gemma":[0.0003289635,0.0002603549,0.0003490457,0.0003701958,0.0004058911,0.0005041538,0.0005761808,0.0003428861,0.0003165531],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001708449,"about_ca_system_score_gemma":0.0002730029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009675937,"about_ca_topic_score_gemma":0.001084194,"domain_scores_codex":[0.9998168,0.00001734315,0.00002114399,0.00007562848,0.00002690893,0.00004215707],"domain_scores_gemma":[0.9997407,0.00004815939,0.00008542984,0.00002828063,0.00004645626,0.00005095098],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001710235,0.00002643152,0.0505719,0.000106684,0.00001670785,0.0001757331,0.0002167873,0.0000796866,0.9444385,0.00008167354,0.0000369013,0.004078061],"study_design_scores_gemma":[0.00002007764,0.0009387293,0.7013832,0.00008888129,0.0001577113,0.001564307,0.001321433,0.001537483,0.2885762,0.000489301,0.003890062,0.00003250041],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961421,0.0007010636,0.001498829,0.00008077287,0.000009148825,0.00003034774,0.0004422259,0.00002516917,0.001070371],"genre_scores_gemma":[0.9938746,0.0006705138,0.003918426,0.0001035276,0.00001971859,0.00004346589,0.0006288231,0.00001134187,0.0007296184],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009675937,"threshold_uncertainty_score":0.002096474,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01118261088142775,"score_gpt":0.2306044966987023,"score_spread":0.2194218858172746,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}