{"id":"W2090533040","doi":"10.1016/j.micinf.2003.12.006","title":"Genetic characterization of the Guinea-Bissau family of Mycobacterium tuberculosis complex strains","year":2004,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University Health Centre","funders":"Vetenskapsrådet","keywords":"Mycobacterium tuberculosis complex; Biology; Tuberculosis; Mycobacterium tuberculosis; New guinea; Genotype; Mycobacterium bovis; Genetics; Species complex; Microbiology; Gene; Virology; Phylogenetic tree; Ethnology; Medicine; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001133235,0.00008242544,0.000221907,0.0000725943,0.00005072153,0.000004880437,0.00003166122,0.00007549521,0.00004015611],"category_scores_gemma":[0.00005811837,0.00005663385,0.00008081135,0.0001583822,0.0001320082,0.00004467921,0.0000362326,0.00008975367,0.000002403104],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003664544,"about_ca_system_score_gemma":0.00004040803,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001359031,"about_ca_topic_score_gemma":0.00007269321,"domain_scores_codex":[0.9993329,0.00005538808,0.0002673576,0.0001254184,0.00007802712,0.0001409179],"domain_scores_gemma":[0.9995832,0.00001165566,0.00009691792,0.0001521298,0.0001071326,0.00004892598],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002329123,0.00007761421,0.140649,0.0001338049,0.00003819812,2.842645e-7,0.0000745132,0.00001644288,0.8564737,0.00005854195,0.0000787504,0.002375773],"study_design_scores_gemma":[0.000565251,0.0002742862,0.9259967,0.00007460801,0.00004457523,0.00003980721,0.00001158146,0.00006353106,0.070858,0.00003973567,0.001987539,0.00004443827],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977779,0.00007772189,0.0003916392,0.001146242,0.00008715843,0.0002268775,0.00003157818,0.00001097824,0.0002499318],"genre_scores_gemma":[0.9983154,0.001018554,0.0001669827,0.0003402338,0.00007318705,0.000005493438,0.00004593103,0.000008234742,0.00002599725],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7856157,"threshold_uncertainty_score":0.2309461,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02305963778013183,"score_gpt":0.2775163551659711,"score_spread":0.2544567173858393,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}