{"id":"W2090667156","doi":"10.1186/1471-2334-13-324","title":"Indeterminate tcdB using a Clostridium difficile PCR assay: a retrospective cohort study","year":2013,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto; Mount Sinai Hospital; Bridgepoint Active Healthcare; University Health Network","funders":"","keywords":"Medicine; Clostridium difficile; Multiple Loci VNTR Analysis; Indeterminate; Clostridioides; Medical microbiology; Internal medicine; Parasitology; GeneXpert MTB/RIF; Genotyping; Virology; Polymerase chain reaction; Microbiology; Pathology; Genotype; Biology; Antibiotics; Gene; Sputum; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001886133,0.0006032389,0.0006439498,0.001055414,0.0009210105,0.00142219,0.0007281982,0.0007247491,0.001350757],"category_scores_gemma":[0.005559077,0.0009431208,0.000475106,0.001583524,0.0008351121,0.001146769,0.0008383863,0.001120031,0.0003261356],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006270135,"about_ca_system_score_gemma":0.0005908717,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005708202,"about_ca_topic_score_gemma":0.004203014,"domain_scores_codex":[0.9977532,0.000481083,0.0002497666,0.0006889402,0.0004826086,0.000344287],"domain_scores_gemma":[0.9951733,0.0009964443,0.001973259,0.0006698333,0.0004928821,0.0006942497],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007750956,0.00002938987,0.9990865,0.000003344196,0.00001565004,0.0002595281,0.00007471971,0.00001065958,0.0001171102,0.000007183665,0.00002702496,0.0002914729],"study_design_scores_gemma":[0.00001808757,0.000448012,0.9943749,0.00001365276,0.00005883277,0.00378857,0.0005461957,0.0003252305,0.0001428923,0.00002834468,0.0002405729,0.00001475983],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994847,0.0001394407,0.00009884658,0.00001322971,0.000003907143,0.00001159573,0.00009133327,0.000002936107,0.000154112],"genre_scores_gemma":[0.9997075,0.00005748204,0.00006877234,0.00001951797,0.000005985986,0.000006355844,0.0001011819,0.000002598769,0.00003066586],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005708202,"threshold_uncertainty_score":0.01134992,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02312092694360581,"score_gpt":0.2997747692017415,"score_spread":0.2766538422581357,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}