{"id":"W2090803844","doi":"10.1038/ng1819","title":"A genetic signature of interspecies variations in gene expression","year":2006,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":289,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Weizmann Institute of Science; University Health Network; Harvard University","keywords":"Biology; Gene; Genetics; Gene expression; Promoter; TATA box; Regulation of gene expression; Phenotype; Functional divergence; Evolutionary biology; Computational biology; Gene family","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001126891,0.0001752312,0.0001656617,0.0001476751,0.00004052278,0.00001811593,0.0003400104,0.0005672671,0.00003439709],"category_scores_gemma":[0.00006016205,0.0001632798,0.00008958222,0.0002780699,0.00008691267,0.000002135526,0.0001969327,0.0003701554,0.000004769765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001947103,"about_ca_system_score_gemma":0.0000934641,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001779819,"about_ca_topic_score_gemma":0.00008193274,"domain_scores_codex":[0.9986508,0.00006910972,0.0003083221,0.0003715945,0.0003025679,0.000297562],"domain_scores_gemma":[0.9992146,0.00001711113,0.00008510162,0.0004262568,0.0001992059,0.00005771426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005854977,0.000128619,0.02026252,0.0000225069,0.00001151265,0.000005480063,0.00003822265,0.00225063,0.9741158,0.00006237361,0.00260099,0.000442731],"study_design_scores_gemma":[0.000488862,0.000159043,0.09155212,0.00002241742,0.000008231169,0.000009018194,0.00002836547,0.0002672087,0.9003696,0.0005241401,0.006390914,0.0001800947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9825465,0.01327624,0.002009648,0.00009651874,0.0002045911,0.0002242323,0.00005958381,0.000007883918,0.001574771],"genre_scores_gemma":[0.9819182,0.0004726307,0.01636203,0.00006901738,0.0004206976,0.00001678025,0.000105973,0.00002767385,0.0006069544],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07374628,"threshold_uncertainty_score":0.6658359,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005589514399701219,"score_gpt":0.2570306892984499,"score_spread":0.2514411748987487,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}