{"id":"W2090814041","doi":"10.1111/j.1574-695x.2011.00901.x","title":"Global gene expression profiling of<i>Ehrlichia ruminantium</i>at different stages of development","year":2011,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Biology; Ehrlichia; Gene; Virulence; Microbiology; Ehrlichia chaffeensis; Rickettsia; Obligate; Intracellular parasite; Genome; Genetics; Virology; Polymerase chain reaction; Virus; Tick","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003585009,0.000488643,0.001158273,0.0002109357,0.0002042958,0.000002196565,0.0008677744,0.001322105,0.003989012],"category_scores_gemma":[0.0004232416,0.0003865754,0.0002521391,0.0002148858,0.002244376,0.00005116143,0.0009958929,0.0004650852,0.0003007618],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001818161,"about_ca_system_score_gemma":0.0003766489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000210202,"about_ca_topic_score_gemma":0.0001441502,"domain_scores_codex":[0.996331,0.0007109244,0.001274231,0.0007169468,0.00007046217,0.0008964372],"domain_scores_gemma":[0.9981361,0.000253219,0.0006777526,0.0006568254,0.0001892669,0.00008681747],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006354006,0.0009094962,0.1728624,0.00006033261,0.0007510555,0.00002136167,0.0004192205,2.77886e-7,0.8212812,0.0004124296,0.0005332875,0.002113617],"study_design_scores_gemma":[0.001917567,0.0005642273,0.127729,0.0001177945,0.00008779973,0.0005874436,0.00009692877,1.360333e-7,0.8658507,0.00008085088,0.002669533,0.0002979848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9842437,0.01182656,0.0004864161,0.00004512753,0.002206401,0.0004126595,0.000215724,0.0001292778,0.0004341601],"genre_scores_gemma":[0.9978226,0.0003548976,0.0008073432,0.0001125744,0.00003082712,0.00006534044,0.0005475933,0.00003169633,0.0002270596],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04513339,"threshold_uncertainty_score":0.9999744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01269663043700425,"score_gpt":0.2354338295006304,"score_spread":0.2227371990636261,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}