{"id":"W2090950329","doi":"10.3389/fpls.2011.00034","title":"The iPlant Collaborative: Cyberinfrastructure for Plant Biology","year":2011,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":463,"is_retracted":false,"has_abstract":true,"ca_institutions":"Occupational Cancer Research Centre; Cancer Care Ontario; Ontario Institute for Cancer Research","funders":"National Science Foundation","keywords":"Cyberinfrastructure; Data science; Computer science; Grand Challenges","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003389172,0.0001089078,0.0001112759,0.00004759834,0.0003083056,0.00002013329,0.0004523122,0.00006121143,8.22663e-7],"category_scores_gemma":[0.00007893525,0.00007229774,0.00002580266,0.0001533719,0.0005607948,0.000001237215,0.0001143411,0.00004798605,5.05873e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001441177,"about_ca_system_score_gemma":0.0001434796,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001292418,"about_ca_topic_score_gemma":0.00005921686,"domain_scores_codex":[0.999115,0.00001987443,0.0001421129,0.0003136954,0.00006549672,0.0003438127],"domain_scores_gemma":[0.9996088,0.00001674488,0.00006219458,0.0002104342,0.00005280065,0.00004908446],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0009838523,0.00006299565,0.3096177,0.00001800316,0.000121352,0.00000790563,0.001853291,0.00006314746,0.5932632,0.009776336,0.07059079,0.01364142],"study_design_scores_gemma":[0.001022321,0.0007210706,0.1235491,0.00001496004,0.00001751279,0.00003562069,0.001677795,0.000644744,0.1801125,0.009395943,0.6822708,0.0005375613],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9804067,0.003846004,0.005937064,0.0001160643,0.00442685,0.0006419691,0.001185604,0.000005280381,0.003434481],"genre_scores_gemma":[0.9818731,0.001014234,0.01668501,0.0001086157,0.0001115783,0.00006182023,0.00004433547,0.000007441451,0.00009385657],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.61168,"threshold_uncertainty_score":0.2948216,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009553981962646054,"score_gpt":0.2243296175547628,"score_spread":0.2147756355921168,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}