{"id":"W2091237463","doi":"10.1093/gbe/evu275","title":"Intraisolate Mitochondrial Genetic Polymorphism and Gene Variants Coexpression in Arbuscular Mycorrhizal Fungi","year":2014,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Espace pour la vie; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; ConocoPhillips","keywords":"Biology; Mitochondrial DNA; Genetics; Nuclear gene; Nonsynonymous substitution; Genome; Gene; Rhizophagus irregularis; Sanger sequencing; Genetic variation; Heteroplasmy; Nuclear DNA; DNA sequencing; Symbiosis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001255663,0.000127086,0.0001606724,0.00002741088,0.0001778768,0.00002066608,0.00007750145,0.0002060174,0.0003841968],"category_scores_gemma":[0.00006581333,0.00005997575,0.00002979356,0.0001121199,0.00002114073,0.00007160994,0.0000562625,0.0001320686,0.00007039284],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001662625,"about_ca_system_score_gemma":0.000004702096,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007586848,"about_ca_topic_score_gemma":0.000126224,"domain_scores_codex":[0.9990436,0.0001581864,0.0001871058,0.000315565,0.00004195393,0.0002535675],"domain_scores_gemma":[0.9994965,0.0002931747,0.0000556805,0.00004733518,0.0000184091,0.00008887942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009861291,0.000021747,0.1839208,0.000003067675,0.000006462096,0.000001888847,0.0000343655,0.000007873144,0.8106937,0.001211487,0.00006527983,0.003934747],"study_design_scores_gemma":[0.0001574244,0.0002828214,0.9847054,0.00002001333,0.00001415704,0.0001025607,0.00002032596,0.001214397,0.000325897,0.006324346,0.006647618,0.0001849919],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994513,0.003549455,0.0007093321,0.0001710156,0.0004519298,0.0001451281,0.0001776328,0.00002646778,0.0002560318],"genre_scores_gemma":[0.9971044,0.001472995,0.0003562505,0.00009327457,0.0005117168,0.00001177402,0.00040113,0.000001014974,0.00004743314],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8103678,"threshold_uncertainty_score":0.4206686,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00520013776455124,"score_gpt":0.1885110696294217,"score_spread":0.1833109318648705,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}