{"id":"W2091344286","doi":"10.1186/1471-2229-10-226","title":"Functional Annotation, Genome Organization and Phylogeny of the Grapevine (Vitis vinifera) Terpene Synthase Gene Family Based on Genome Assembly, FLcDNA Cloning, and Enzyme Assays","year":2010,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":451,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Genome Canada","keywords":"Biology; Gene family; Pseudogene; Gene; Genome; Genetics; Gene cluster; Sequence assembly; Phylogenetic tree; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002717565,0.0002324543,0.0002210122,0.00006048055,0.0001656468,0.00002048825,0.0001880972,0.0003899004,0.0000319523],"category_scores_gemma":[0.0002976523,0.0001748973,0.00005458148,0.0001241333,0.000220744,0.000005017034,0.0001108163,0.0001552039,0.000002580706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007246915,"about_ca_system_score_gemma":0.0001179051,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001340961,"about_ca_topic_score_gemma":0.00004168423,"domain_scores_codex":[0.9987904,0.0001126639,0.000271044,0.0004832839,0.0001103647,0.000232215],"domain_scores_gemma":[0.9991793,0.0001073901,0.0001919144,0.0003189479,0.0001168061,0.00008564406],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001474164,0.0000701256,0.01530142,0.00003030855,0.00003856114,0.000002575207,0.000006329682,0.00002168392,0.9840734,0.00006915807,0.0001245044,0.0001144965],"study_design_scores_gemma":[0.0004213271,0.0001700572,0.2163632,0.000008704174,0.00003402741,0.0001514131,0.000007209553,0.0001212123,0.7805387,0.00001207544,0.001979796,0.0001923018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966875,0.0002959237,0.0008120051,0.0001091153,0.000180487,0.0001760761,0.001615853,0.00001424999,0.0001087409],"genre_scores_gemma":[0.9955695,0.000156948,0.0006060823,0.0003942448,0.0002582981,0.00001111179,0.002911202,0.00001770611,0.00007489943],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2035347,"threshold_uncertainty_score":0.7132106,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00862097186775641,"score_gpt":0.1960438908198638,"score_spread":0.1874229189521074,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}