{"id":"W2091512413","doi":"10.1371/journal.pone.0065132","title":"Interactions between the R2R3-MYB Transcription Factor, AtMYB61, and Target DNA Binding Sites","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; DNA; Transcription factor; MYB; Gene; Genetics; Transcription (linguistics); DNA binding site; Response element; Regulatory sequence; Promoter; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002562045,0.0002701032,0.0003491759,0.0002345054,0.0003476517,0.0003175515,0.0002752529,0.0004170332,0.002415041],"category_scores_gemma":[0.0003592649,0.0002704799,0.0003641767,0.0001859993,0.0002339649,0.0002933989,0.0003991695,0.0004802253,0.00106208],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003933972,"about_ca_system_score_gemma":0.0001982636,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000588087,"about_ca_topic_score_gemma":0.001065464,"domain_scores_codex":[0.99978,0.00003242199,0.00001063182,0.00006706855,0.00005938233,0.00005057296],"domain_scores_gemma":[0.9998012,0.00005946253,0.00004078184,0.00001352186,0.00001550812,0.00006952936],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001280454,0.00002189326,0.002040926,0.00005521519,0.000009770712,0.0001153409,0.00003443616,0.0001690569,0.9953258,0.0002179841,0.00006691273,0.001814677],"study_design_scores_gemma":[0.00005886118,0.0004414346,0.08514361,0.0000425008,0.00004523164,0.001015641,0.000256743,0.009656488,0.8976629,0.0005978295,0.005048797,0.00002988851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991831,0.002090366,0.004058196,0.00009125556,0.0000196518,0.00001792475,0.0001001261,0.00007578141,0.001715669],"genre_scores_gemma":[0.9954041,0.0004275448,0.002485856,0.00007596054,0.00001728964,0.00001840359,0.0002084806,0.00001755421,0.001344845],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002415041,"threshold_uncertainty_score":0.008079112,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03950590798339691,"score_gpt":0.2390273877407215,"score_spread":0.1995214797573246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}