{"id":"W2092125594","doi":"10.1007/s00253-004-1692-5","title":"Analysis of the bacterial community inhabiting an aerobic thermophilic sequencing batch reactor (AT-SBR) treating swine waste","year":2004,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université du Québec; Institut National de la Recherche Scientifique","funders":"","keywords":"Temperature gradient gel electrophoresis; Thermophile; Biology; 16S ribosomal RNA; Bacilli; Library; Bacteria; Microbiology; clone (Java method); Genetics; DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003450475,0.0002014121,0.0004086492,0.00005910551,0.0005175322,0.000014126,0.0004565423,0.0006054884,0.00004421826],"category_scores_gemma":[0.0000277546,0.00007943263,0.0001099084,0.0007412675,0.000616933,0.00003542508,0.000459808,0.0004628449,0.000002152165],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007874971,"about_ca_system_score_gemma":0.00001406864,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004320387,"about_ca_topic_score_gemma":0.002984793,"domain_scores_codex":[0.9988301,0.0001336461,0.0003409879,0.0003247685,0.00003265707,0.0003378601],"domain_scores_gemma":[0.9993489,0.0001131119,0.0002515916,0.0002162486,0.00003041369,0.00003974638],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004695047,0.0000757927,0.001157623,0.00000504711,0.0001698904,6.65483e-7,0.0001872607,0.0000113319,0.9919563,0.001698286,0.000001292925,0.004689566],"study_design_scores_gemma":[0.0003988106,0.0003873013,0.01119457,0.00001777456,0.0002299,0.00003883205,0.001100264,0.00001305867,0.9855931,0.0006358853,0.0001787169,0.000211734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984676,0.0000526021,0.000004313564,0.0008607318,0.00006140863,0.0002119116,0.00009573693,0.00007145364,0.0001742604],"genre_scores_gemma":[0.9993335,0.00003163607,0.0001174096,0.0001942697,0.00004587439,0.000007860666,0.0002589925,0.000001973359,0.000008460343],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01003694,"threshold_uncertainty_score":0.4670081,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01397561641382646,"score_gpt":0.1974032635655672,"score_spread":0.1834276471517408,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}