{"id":"W2092899041","doi":"10.1073/pnas.0707419104","title":"Nucleomorph genome of <i>Hemiselmis andersenii</i> reveals complete intron loss and compaction as a driver of protein structure and function","year":2007,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":154,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Genome; Genetics; Genome size; Intron; Gene; Genome evolution","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004035611,0.0001829666,0.0001696521,0.0002763794,0.0002424228,0.0002381186,0.0001928855,0.0002578498,0.0007934837],"category_scores_gemma":[0.00009019598,0.0001131967,0.0002681802,0.0002461291,0.0001727042,0.0001151882,0.0002374665,0.0003468137,0.0002768655],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002875622,"about_ca_system_score_gemma":0.0002109927,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003825636,"about_ca_topic_score_gemma":0.003700898,"domain_scores_codex":[0.9999515,0.000002400738,0.000002554149,0.00002179009,0.0000130912,0.000008744929],"domain_scores_gemma":[0.9998953,0.00002286548,0.00003004246,0.00001470079,0.00001062924,0.00002643426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000985236,0.000008777795,0.001846447,0.00003139078,0.000005291616,0.0000790913,0.00004192167,0.00004936463,0.9965068,0.00003842098,0.00001978646,0.001274213],"study_design_scores_gemma":[0.00003337226,0.0004637929,0.5840589,0.00003427007,0.0000965245,0.002305942,0.0006309387,0.001661716,0.4009163,0.0001939785,0.009572541,0.00003163394],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958716,0.000197222,0.0009574745,0.00003185954,0.000005221691,0.00001210182,0.001795672,0.00004796753,0.001080842],"genre_scores_gemma":[0.9871593,0.0002334005,0.002459796,0.00006420963,0.000005095219,0.00001938411,0.008262781,0.00004329722,0.001752721],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003825636,"threshold_uncertainty_score":0.007606745,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01812667847827092,"score_gpt":0.2513661022052885,"score_spread":0.2332394237270176,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}