{"id":"W2092995073","doi":"10.1074/jbc.m111.229781","title":"5′-Methylthioadenosine Nucleosidase Is Implicated in Playing a Key Role in a Modified Futalosine Pathway for Menaquinone Biosynthesis in Campylobacter jejuni","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Campylobacter jejuni; Biochemistry; Mutant; Hydrolase; Streptomyces; Biosynthesis; Enzyme; Biology; Metabolic pathway; Microbiology; Escherichia coli; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008188996,0.0003765776,0.0002666789,0.0001839469,0.0001572897,0.0002330509,0.0001742169,0.0003241005,0.0007934686],"category_scores_gemma":[0.0001849485,0.000124662,0.0003264046,0.0001678621,0.0001753315,0.0001668129,0.0002330083,0.000367734,0.0003230778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000246645,"about_ca_system_score_gemma":0.0002306976,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001952561,"about_ca_topic_score_gemma":0.001384067,"domain_scores_codex":[0.9999177,0.000009472623,0.000008103925,0.00002188022,0.00002601175,0.00001680675],"domain_scores_gemma":[0.9998864,0.00001837851,0.00003743589,0.00001102969,0.00001630446,0.00003046219],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008268162,0.00001223354,0.0008660177,0.00004322928,0.000003324147,0.0001768542,0.00002003317,0.00005850192,0.9975421,0.00006220155,0.0000230462,0.001109759],"study_design_scores_gemma":[0.00001221023,0.0002716297,0.0409329,0.00002277433,0.00003922428,0.001281919,0.0001585888,0.001899854,0.9514788,0.0001346504,0.003747027,0.00002032727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954621,0.001002023,0.002073393,0.0001231215,0.00002833175,0.00001668376,0.0003135192,0.00006701315,0.0009137517],"genre_scores_gemma":[0.9943996,0.000381181,0.003163139,0.00003451529,0.000006464373,0.00001306244,0.0006058409,0.00001619706,0.001379831],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001952561,"threshold_uncertainty_score":0.003882468,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03844268403088939,"score_gpt":0.2694849586697686,"score_spread":0.2310422746388792,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}