{"id":"W2093079942","doi":"10.2353/ajpath.2009.080273","title":"CD83+CCR7− Dendritic Cells Accumulate in the Subepithelial Dome and Internalize Translocated Escherichia coli HB101 in the Peyer's Patches of Ileal Crohn's Disease","year":2008,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University","funders":"Vetenskapsrådet","keywords":"Peyer's patch; C-C chemokine receptor type 7; Microbiology; Biology; Crohn's disease; Disease; Immunology; Medicine; Pathology; Inflammation; Antigen; Chemokine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006297071,0.0001777777,0.0003203603,0.0001048312,0.00004883955,0.00001204132,0.0004801965,0.00006564837,0.00001025078],"category_scores_gemma":[0.000107554,0.0001176752,0.0001434398,0.0001720839,0.0009630338,0.00001094903,0.00004160485,0.000261044,0.000001336996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001345312,"about_ca_system_score_gemma":0.0001857263,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005465504,"about_ca_topic_score_gemma":0.00009428033,"domain_scores_codex":[0.9978518,0.0009492639,0.0005349406,0.0001951898,0.0001905984,0.0002781801],"domain_scores_gemma":[0.9990875,0.00009192105,0.0003531273,0.000272393,0.00009082961,0.0001042592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.008368566,0.001098889,0.3541288,0.000117383,0.0001624153,0.06169925,0.01626781,0.0008823561,0.5537524,0.0001007717,0.0003052921,0.003116105],"study_design_scores_gemma":[0.001764543,0.0006322982,0.9908167,0.00003929347,0.000070447,0.000948102,0.002248247,0.00005688489,0.002879882,0.0001351849,0.0002266011,0.0001818915],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987514,0.000448567,0.0001468419,0.0003296681,0.00008541218,0.000174578,0.00002921723,0.00000187668,0.00003245661],"genre_scores_gemma":[0.9983551,0.0004767896,0.0001585302,0.0008572999,0.0001099934,0.00001097019,0.000005414578,0.00001710116,0.000008819268],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6366878,"threshold_uncertainty_score":0.4798658,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009629550641426409,"score_gpt":0.2446448693551109,"score_spread":0.2350153187136845,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}