{"id":"W2093569046","doi":"10.1111/j.1399-0039.2006.00594.x","title":"The <i>PTPN22 </i>1858T variant is not associated with primary biliary cirrhosis","year":2006,"lang":"en","type":"article","venue":"Tissue Antigens","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Toronto Western Hospital; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"PTPN22; Primary biliary cirrhosis; Autoimmune hepatitis; Single-nucleotide polymorphism; Allele; Allele frequency; Autoimmune disease; Medicine; Immunology; Minor allele frequency; SNP; Genotype; Autoantibody; Internal medicine; Gastroenterology; Genetics; Biology; Hepatitis; Antibody; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002299934,0.0002027838,0.0001795264,0.00002233649,0.0003364612,0.00007556762,0.0002454978,0.0001697227,0.0000375342],"category_scores_gemma":[0.00004183809,0.0001450133,0.00008803004,0.0001735346,0.0001298658,0.000005155483,0.00008129315,0.000104259,0.00004355022],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000209005,"about_ca_system_score_gemma":0.00008809992,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002200733,"about_ca_topic_score_gemma":0.0002892567,"domain_scores_codex":[0.9986629,0.00006373892,0.0002142736,0.000359509,0.0002186002,0.0004809646],"domain_scores_gemma":[0.9992762,0.00003887506,0.000138139,0.0003873547,0.0001023474,0.00005703681],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001477463,0.0006623977,0.0451788,0.00002739357,0.0008125113,0.00006037853,0.000145559,0.00007801018,0.6648362,0.0005479077,0.2697524,0.01775062],"study_design_scores_gemma":[0.00140828,0.0005316806,0.1176338,0.00004339619,0.0001456825,0.000008622483,0.0001088108,0.00003734491,0.2256487,0.0002958993,0.6534284,0.0007092851],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9796891,0.001983346,0.0001196181,0.001947641,0.0001670908,0.0003095897,0.0001400856,0.00005254139,0.01559106],"genre_scores_gemma":[0.9861912,0.000436192,0.00008964658,0.001768681,0.0001611231,0.00002138455,0.0004055817,0.00004420003,0.01088204],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4391875,"threshold_uncertainty_score":0.5913471,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004280305252525324,"score_gpt":0.1993609452351921,"score_spread":0.1950806399826668,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}