{"id":"W2093663214","doi":"10.1007/s00438-010-0585-9","title":"Ribosomal RNA genes in Euglena gracilis mitochondrial DNA: fragmented genes in a seemingly fragmented genome","year":2010,"lang":"en","type":"article","venue":"Molecular Genetics and Genomics","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Euglena gracilis; Mitochondrial DNA; Ribosomal RNA; Genetics; Genome; Gene; Mitochondrial ribosome; Ribosome; RNA; Chloroplast","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002093014,0.0003771346,0.000329483,0.0001965791,0.0001204808,0.0000761921,0.0004255498,0.0004586209,0.00002416869],"category_scores_gemma":[0.00003756303,0.0004410415,0.0001290761,0.0002061683,0.0001746255,0.000007026839,0.0004521766,0.0003328672,0.00000988384],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003590972,"about_ca_system_score_gemma":0.0001327691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001220413,"about_ca_topic_score_gemma":0.0008529944,"domain_scores_codex":[0.9978864,0.00009223747,0.000467325,0.0007788009,0.0001961486,0.0005790851],"domain_scores_gemma":[0.9990287,0.00001204285,0.0001287508,0.0005480099,0.00008071448,0.000201779],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001579224,0.0001412062,0.02136986,0.0000266914,0.00006290875,0.00009315997,0.0002151236,0.0005714109,0.9744282,0.00005520647,0.00002524788,0.002853001],"study_design_scores_gemma":[0.003761358,0.0004434504,0.06107382,0.00002043174,0.00006257772,0.00006475514,0.0001943775,0.0009032899,0.9038844,0.0006355833,0.02792216,0.001033827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916924,0.005769847,0.001037666,0.000108407,0.0003936045,0.0005773291,0.0001474956,0.0000120561,0.0002611811],"genre_scores_gemma":[0.9918607,0.001910825,0.005124005,0.0003434232,0.0002593362,0.00004197922,0.0003228087,0.00005094852,0.00008599542],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07054389,"threshold_uncertainty_score":0.9998041,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004512313334613158,"score_gpt":0.2023195229808176,"score_spread":0.1978072096462044,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}