{"id":"W2093706611","doi":"10.1186/1471-2199-10-18","title":"Discriminating nucleosomes containing histone H2A.Z or H2A based on genetic and epigenetic information","year":2009,"lang":"en","type":"article","venue":"BMC Molecular Biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Nucleosome; Biology; Genetics; Histone; Epigenetics; Epigenomics; Histone code; Chromatin; Histone methylation; Histone H2A; Promoter; DNA methylation; DNA; Computational biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035792,0.0003894412,0.0003350491,0.0002827141,0.0002067215,0.0004762008,0.0005077234,0.0004909306,0.0008782482],"category_scores_gemma":[0.0006799508,0.0001974614,0.000468827,0.0001669273,0.0003346338,0.000330364,0.0002411429,0.0002174121,0.0003790852],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004562578,"about_ca_system_score_gemma":0.0003239151,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002232358,"about_ca_topic_score_gemma":0.003926281,"domain_scores_codex":[0.9999151,0.00001437478,0.00000421267,0.00003486914,0.00001819519,0.00001324633],"domain_scores_gemma":[0.999749,0.0001312537,0.00004280363,0.00002624858,0.00002578079,0.0000249584],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001532116,0.0002176151,0.09389921,0.0004174385,0.0001974222,0.0002471949,0.0001173093,0.3872171,0.4536106,0.006374064,0.0008495352,0.05532049],"study_design_scores_gemma":[0.00003274247,0.0001580923,0.00898821,0.00001108137,0.00005635905,0.000186134,0.00002911276,0.9302537,0.05715919,0.002436194,0.0006659762,0.00002323853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8463499,0.0004088749,0.150983,0.00006965376,0.00003321029,0.00004168611,0.0002640887,0.0002671795,0.00158252],"genre_scores_gemma":[0.9758431,0.0001241795,0.02316939,0.0000223066,0.000007513132,0.00001964058,0.0003423256,0.00001689088,0.0004546259],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002232358,"threshold_uncertainty_score":0.004438758,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007582684044451663,"score_gpt":0.260807951560554,"score_spread":0.2532252675161023,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}