{"id":"W2094167514","doi":"10.1089/aid.2007.0120","title":"R5 and X4 HIV Viruses Differentially Modulate Host Gene Expression in Resting CD4 <sup>+</sup> T Cells","year":2008,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Tropism; Biology; T-cell receptor; Transcriptome; Tissue tropism; Phenotype; Actin; T cell; Gene expression; Gene; Signal transduction; Cell biology; Virology; Virus; Immunology; Genetics; Immune system","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009667614,0.0001198614,0.0001453002,0.0001315133,0.0001046611,0.0002971862,0.00005952172,0.0001395277,0.001056824],"category_scores_gemma":[0.0001319115,0.00006984186,0.0001658556,0.0001090676,0.000119537,0.0001469421,0.0001154525,0.0001844812,0.0002456054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001232694,"about_ca_system_score_gemma":0.00007429002,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002706484,"about_ca_topic_score_gemma":0.0003890924,"domain_scores_codex":[0.9998831,0.00002515279,0.000006905616,0.00002835247,0.0000189753,0.00003751252],"domain_scores_gemma":[0.99993,0.00002106407,0.00001941546,0.000007113243,0.000009563601,0.00001280983],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002253089,0.000009692775,0.001315112,0.0000188449,0.000004038785,0.00003222389,0.00004605258,0.00002773931,0.9970258,0.00004042579,0.00001446703,0.001240245],"study_design_scores_gemma":[0.00002018361,0.001448507,0.1669369,0.00002414538,0.00004615903,0.0005112578,0.000503568,0.0008699297,0.827401,0.000123822,0.002101972,0.0000125888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986517,0.0004914483,0.0003430772,0.00001137365,0.000003253379,0.000004510933,0.0001327841,0.000008832905,0.0003530663],"genre_scores_gemma":[0.997466,0.0004117789,0.0006540891,0.0000367814,0.000006234755,0.00001690092,0.000464114,0.000006922299,0.0009371807],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001056824,"threshold_uncertainty_score":0.00353539,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06801710929872773,"score_gpt":0.3229905770399612,"score_spread":0.2549734677412335,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}