{"id":"W2094453322","doi":"10.1371/journal.pbio.0000074","title":"Transcriptome Analysis of Mouse Stem Cells and Early Embryos","year":2003,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":189,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute; National Institute on Aging; National Institutes of Health","keywords":"Biology; Embryonic stem cell; Transcriptome; Stem cell; Induced pluripotent stem cell; Embryo; Cell biology; Gene; Genetics; Computational biology; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001464721,0.0002009011,0.0002345941,0.0005314289,0.0002055115,0.0003405983,0.0001139199,0.0001111615,0.0005699456],"category_scores_gemma":[0.0002304546,0.0001190405,0.0002679732,0.0005270774,0.0001163121,0.0001520987,0.0001339875,0.0002626277,0.0003596365],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001876292,"about_ca_system_score_gemma":0.000250259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004968125,"about_ca_topic_score_gemma":0.0007463248,"domain_scores_codex":[0.9998764,0.00001719828,0.00001253962,0.00002799035,0.00004746457,0.00001841043],"domain_scores_gemma":[0.9999297,0.00001592319,0.00001654343,0.00000919539,0.00001516941,0.00001345119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008018553,0.000005382193,0.001330784,0.00004945994,0.000007115099,0.00004511383,0.00003075437,0.00009535862,0.993431,0.0001114491,0.00005762766,0.004755686],"study_design_scores_gemma":[0.00001222566,0.0003026864,0.2301881,0.00005400227,0.0001064559,0.0007852449,0.0001908618,0.001981033,0.7475556,0.0006564237,0.01815026,0.00001707607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9651913,0.003196805,0.01705987,0.00007627183,0.00002753419,0.00005663426,0.01035068,0.000200856,0.003840052],"genre_scores_gemma":[0.9009836,0.006514331,0.03976226,0.0002112311,0.00003273322,0.0002678507,0.04255699,0.0001879359,0.00948298],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005699456,"threshold_uncertainty_score":0.001906633,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0188373531241441,"score_gpt":0.2523750872245156,"score_spread":0.2335377341003715,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}