{"id":"W2095065507","doi":"10.1080/07060660609507298","title":"Identification and phylogenetic analysis of sequences of<i>Bean pod mottle virus</i>,<i>Soybean mosaic virus</i>, and<i>Cowpea chlorotic mottle virus</i>in expressed sequence tag data from soybean","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Plant Pathology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; University of Washington","keywords":"Biology; Virology; Virus; Plant virus; Soybean mosaic virus; Cucumber mosaic virus; Mosaic virus; Phylogenetic tree; Sequence analysis; Genetics; Gene; Potyvirus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003210001,0.0002490038,0.0002400148,0.0008816023,0.0004116294,0.0003398714,0.0001234607,0.0002194985,0.0006142553],"category_scores_gemma":[0.0007572013,0.0001300524,0.0004404173,0.001203317,0.0001432974,0.0001824447,0.0001908445,0.0004582731,0.0004303289],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002907094,"about_ca_system_score_gemma":0.0004162776,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002203066,"about_ca_topic_score_gemma":0.004991637,"domain_scores_codex":[0.9998122,0.00002960567,0.00002662898,0.0000525709,0.00004934403,0.00002975257],"domain_scores_gemma":[0.9995983,0.00009562897,0.0001038322,0.00004504923,0.00007165203,0.00008564011],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000788589,0.0001518587,0.08508933,0.0002666374,0.00008234411,0.000619531,0.000719347,0.00136259,0.8966972,0.0002933608,0.0002769729,0.01365224],"study_design_scores_gemma":[0.00005113654,0.0007577196,0.8540247,0.0001656623,0.0003248631,0.003116,0.001404283,0.01284361,0.1108416,0.0004412521,0.01598528,0.00004390963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947108,0.0001767317,0.001541018,0.00002735196,0.000005072707,0.00002127428,0.00298505,0.00001576387,0.0005169527],"genre_scores_gemma":[0.9598765,0.0003743145,0.009189179,0.00006821189,0.000008019344,0.00004581889,0.02959709,0.00003546026,0.0008052808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002203066,"threshold_uncertainty_score":0.004380465,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04163212612224609,"score_gpt":0.25072284056705,"score_spread":0.2090907144448039,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}