{"id":"W2095439426","doi":"10.1145/1551950.1551980","title":"Pairwise sequence alignment algorithms","year":2009,"lang":"en","type":"article","venue":"","topic":"Algorithms and Data Compression","field":"Computer Science","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"Pairwise comparison; Alignment-free sequence analysis; Sequence (biology); Multiple sequence alignment; Computer science; Sequence alignment; Algorithm; Sequence database; Smith–Waterman algorithm; Data mining; Artificial intelligence; Biology; Gene; Peptide sequence; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004190424,0.003234415,0.003733703,0.005728866,0.002608785,0.003529612,0.005225298,0.002574535,0.01799409],"category_scores_gemma":[0.01720344,0.001086333,0.002408905,0.01099294,0.001088683,0.005906504,0.003870095,0.003175197,0.02129767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001070001,"about_ca_system_score_gemma":0.002604296,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001040102,"about_ca_topic_score_gemma":0.001250577,"domain_scores_codex":[0.9926018,0.002497297,0.0009490526,0.001524207,0.002104706,0.000322865],"domain_scores_gemma":[0.9940209,0.002256412,0.0006840283,0.001382006,0.001479361,0.0001772383],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.000349073,0.000339867,0.001691305,0.001864422,0.0006688486,0.0003849682,0.0004538419,0.06066058,0.008660941,0.09200479,0.08003292,0.7528884],"study_design_scores_gemma":[0.0001903424,0.0003450609,0.001027613,0.0005357569,0.0002816713,0.001930848,0.0004971294,0.3712738,0.01731939,0.3045935,0.301835,0.0001699789],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.001835287,0.00248138,0.9827145,0.0002520335,0.0003449092,0.0004644876,0.001576817,0.004490599,0.005840065],"genre_scores_gemma":[0.01895733,0.002195474,0.9682013,0.0002422435,0.0002412629,0.0007470538,0.005380875,0.0008607188,0.003173727],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.01799409,"threshold_uncertainty_score":0.06019628,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03001452707153884,"score_gpt":0.2766715539780855,"score_spread":0.2466570269065467,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}