{"id":"W2096039708","doi":"10.1128/cdli.12.9.1020-1028.2005","title":"Major Histocompatibility Complex Class II (HLA-DRB and -DQB) Allele Frequencies in Botswana: Association with Human Immunodeficiency Virus Type 1 Infection","year":2005,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases; Fogarty International Center; National Institutes of Health","keywords":"Human leukocyte antigen; Allele; Genotyping; Biology; Population; Immunology; Major histocompatibility complex; Allele frequency; Locus (genetics); Virology; Genetics; Genotype; Antigen; Medicine; Gene; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007455027,0.0002188859,0.0005681373,0.0001359187,0.0004605496,0.00001736496,0.000122007,0.000364121,0.000474343],"category_scores_gemma":[0.0002838679,0.0001678607,0.00005987065,0.0001808801,0.0003156603,0.0001339517,0.0001844655,0.0006750692,0.0001828238],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001882049,"about_ca_system_score_gemma":0.00007601795,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002367054,"about_ca_topic_score_gemma":0.006223626,"domain_scores_codex":[0.9978156,0.0005078033,0.000661985,0.0004849723,0.00004698328,0.0004826716],"domain_scores_gemma":[0.9989837,0.0003488614,0.0002059381,0.0002905079,0.0001322516,0.0000387709],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009019757,0.001300876,0.9124633,0.00001524643,0.0003899702,0.000007001066,0.0002557717,0.000002543543,0.06321968,0.0005040921,0.001927597,0.01901196],"study_design_scores_gemma":[0.005690348,0.002816641,0.9383876,0.00001463034,0.00004749039,0.00003663601,0.00004728137,0.00001148946,0.0007479049,0.0002080726,0.05181417,0.0001777801],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922513,0.004729982,0.00001108711,0.00174956,0.0001360474,0.0004255459,0.00002409982,0.00005939577,0.0006129376],"genre_scores_gemma":[0.9970363,0.001243385,0.00009386439,0.0001385018,0.0000363193,0.00003995421,0.0002113707,0.00001217651,0.00118812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06247177,"threshold_uncertainty_score":0.684516,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0405857905036003,"score_gpt":0.337855488605847,"score_spread":0.2972696981022467,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}