{"id":"W2096149709","doi":"10.1093/bioinformatics/bti1037","title":"Reversal distance for partially ordered genomes","year":2005,"lang":"en","type":"article","venue":"Computer applications in the biosciences","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Genome; Position (finance); Chromosome; Computer science; Representation (politics); Order (exchange); Gene; Mutation; Genetics; Computational biology; Biology; Algorithm","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001547885,0.0005180567,0.0007455262,0.001880828,0.0006324493,0.001316871,0.001627394,0.0009722646,0.004749771],"category_scores_gemma":[0.01415265,0.0003501354,0.0008449237,0.001253823,0.001135347,0.002365075,0.001396833,0.001405801,0.00070232],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001478248,"about_ca_system_score_gemma":0.00113154,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002153473,"about_ca_topic_score_gemma":0.001718858,"domain_scores_codex":[0.9988658,0.0002862395,0.00007995704,0.0003483198,0.000334651,0.000085161],"domain_scores_gemma":[0.9923359,0.005423074,0.0006555734,0.0007424908,0.000601534,0.000241443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0004084943,0.0001207874,0.007507913,0.0004157496,0.00006763978,0.0003570165,0.0004200092,0.5057901,0.004643327,0.3123192,0.004123912,0.1638259],"study_design_scores_gemma":[0.00003979311,0.0001212488,0.001212757,0.00003378293,0.000017322,0.0002925952,0.0001087804,0.6292209,0.003075875,0.3615016,0.00434765,0.00002770466],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1899576,0.0006311771,0.7974959,0.0009434182,0.00005635312,0.0001678469,0.001566359,0.001552397,0.007628985],"genre_scores_gemma":[0.6949087,0.00042822,0.2947004,0.0002818038,0.00007179704,0.0001987682,0.004676421,0.0003219015,0.004411967],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004749771,"threshold_uncertainty_score":0.01588959,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01449698518350952,"score_gpt":0.2713342964950228,"score_spread":0.2568373113115133,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}