{"id":"W2097238956","doi":"10.1186/1471-2180-7-1","title":"The Francisella pathogenicity island protein IglA localizes to the bacterial cytoplasm and is needed for intracellular growth","year":2007,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":358,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Francisella; Francisella tularensis; Biology; Tularemia; Virulence; Effector; Pathogenicity island; Intracellular parasite; Secretion; Complementation; Intracellular; Microbiology; Cytoplasm; Operon; Type three secretion system; Type VI secretion system; Cell biology; Mutant; Gene; Genetics; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001209958,0.0002093724,0.000203472,0.00002962641,0.000403071,0.00007273327,0.0003668063,0.0003026125,0.00003765767],"category_scores_gemma":[0.000313286,0.0001243337,0.000108998,0.00008866873,0.0002772435,0.000002599701,0.0002193229,0.0001232216,0.00001990224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001340811,"about_ca_system_score_gemma":0.00008353213,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006082781,"about_ca_topic_score_gemma":0.001669538,"domain_scores_codex":[0.9984527,0.0001376028,0.0003004126,0.000454446,0.00005385405,0.0006009447],"domain_scores_gemma":[0.9991124,0.0001390649,0.0000754564,0.0003840342,0.0001723688,0.0001166979],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001665476,0.00002151739,0.0002147528,0.00002376539,0.0000353428,9.476187e-7,0.00009329147,5.53169e-7,0.9886162,0.0001787153,0.00699061,0.002158781],"study_design_scores_gemma":[0.0007052081,0.0003262601,0.0002154208,0.000004464065,0.000008825482,0.00002619597,0.00005594967,0.000008785672,0.5896047,0.00008482669,0.4088203,0.0001390661],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9736029,0.001004153,0.02255715,0.0007959879,0.0003867385,0.001272818,0.0002770338,0.000008120902,0.00009509474],"genre_scores_gemma":[0.9956322,0.0001809085,0.0009881262,0.0007075001,0.0009969817,0.0001148847,0.0001582546,0.00003355364,0.001187607],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4018297,"threshold_uncertainty_score":0.507018,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008733718756922243,"score_gpt":0.2371444955418344,"score_spread":0.2284107767849121,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}