{"id":"W2097508475","doi":"10.1093/bioinformatics/btt138","title":"Cytoscape App Store","year":2013,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":192,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"App store; Computer science; World Wide Web; Software; Open source; Data science; Visualization; Information retrieval; Data mining; Operating system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001159737,0.0001735973,0.0001330708,0.00004078823,0.00009479157,0.00008673879,0.0002612773,0.0001816731,0.0001567943],"category_scores_gemma":[0.00002228194,0.0001486162,0.00008895949,0.00007877955,0.00006500901,0.00001652254,0.0001519655,0.00009754183,0.0009435632],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001232221,"about_ca_system_score_gemma":0.00004937431,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009228143,"about_ca_topic_score_gemma":0.000004216456,"domain_scores_codex":[0.9990509,0.000009142834,0.0003733256,0.0001064629,0.000134459,0.0003257398],"domain_scores_gemma":[0.9992124,0.000006643867,0.000128749,0.0004308397,0.00008403481,0.0001373708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003654893,0.0001129878,0.001601691,0.000225729,0.0002077563,0.000001292414,0.0009568108,0.0004236985,0.02309122,0.002554131,0.7716411,0.199147],"study_design_scores_gemma":[0.001726,0.0006247098,0.004032073,0.00004816756,0.00004535132,0.0001004116,0.001647932,0.07615909,0.01209607,0.001578995,0.9006255,0.001315714],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6401269,0.001408546,0.1272738,0.0009120995,0.001589628,0.0020848,0.00008484632,0.0002532181,0.2262661],"genre_scores_gemma":[0.9444188,0.0002401719,0.04703762,0.002894783,0.00060549,0.00007810898,0.0004206038,0.00004588542,0.004258576],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3042918,"threshold_uncertainty_score":0.9998343,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006885813618096346,"score_gpt":0.2056756389047812,"score_spread":0.1987898252866849,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}