{"id":"W2097725880","doi":"10.1128/jvi.78.1.76-82.2004","title":"Mosaic Evolution of the Severe Acute Respiratory Syndrome Coronavirus","year":2003,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":144,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Coronavirus; Virology; Phylogenetic tree; Virus; Feline infectious peritonitis; Phylogenetics; Novel virus; Gene; Genetics; Genome; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002887539,0.0001417717,0.0001282408,0.0003927218,0.0003385912,0.0002551745,0.0001506474,0.0002127394,0.0004765845],"category_scores_gemma":[0.0005127215,0.0001224206,0.0001859126,0.0002299435,0.0002721193,0.0002380008,0.0003652878,0.0003383326,0.0001552138],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003558107,"about_ca_system_score_gemma":0.00026405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009127402,"about_ca_topic_score_gemma":0.001326283,"domain_scores_codex":[0.9998406,0.00004364165,0.000008232541,0.00003805012,0.00003640948,0.00003307939],"domain_scores_gemma":[0.9998633,0.00002442561,0.00003490435,0.00001449056,0.0000263268,0.00003655483],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005234433,0.00007006266,0.07791264,0.00006026608,0.00004757824,0.001291189,0.0007642455,0.001093243,0.8861153,0.003441492,0.0002240902,0.02845651],"study_design_scores_gemma":[0.0001091015,0.001801045,0.8927752,0.00006324187,0.00012459,0.01240322,0.001273461,0.01482971,0.04741832,0.00671814,0.0224221,0.00006183712],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977555,0.000233968,0.001011866,0.00004331578,0.000004413943,0.000006765583,0.00003404989,0.00001045074,0.0008996526],"genre_scores_gemma":[0.9977895,0.0002223135,0.001334222,0.00003542499,0.000008663088,0.000006378933,0.0001720402,0.000008988028,0.0004225037],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009127402,"threshold_uncertainty_score":0.002581596,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02742932019748756,"score_gpt":0.2476778029687324,"score_spread":0.2202484827712448,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}