{"id":"W2097755017","doi":"10.1093/molbev/msq054","title":"Extensive Divergence in Alternative Splicing Patterns after Gene and Genome Duplication During the Evolutionary History of Arabidopsis","year":2010,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene duplication; Gene; Genome; Genetics; Tandem exon duplication; Segmental duplication; Functional divergence; Alternative splicing; Gene family; Arabidopsis; Abiotic stress; Subfunctionalization; Genome evolution; Evolutionary biology; Arabidopsis thaliana; Concerted evolution; RNA splicing; Exon; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006496449,0.00006450215,0.00007441282,0.00001467752,0.00004964013,0.000002293717,0.00005808189,0.00006702027,0.00001431918],"category_scores_gemma":[0.0000157499,0.00002909136,0.00002125939,0.00004993962,0.0001260572,0.0000272212,0.0000483555,0.00007651364,9.644921e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003346373,"about_ca_system_score_gemma":0.000006616226,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002474824,"about_ca_topic_score_gemma":0.0004911345,"domain_scores_codex":[0.9995258,0.00004697342,0.0001001876,0.000176652,0.00004145421,0.0001089409],"domain_scores_gemma":[0.9998152,0.00002627284,0.00005233386,0.0000430083,0.00003541057,0.00002783519],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003048379,0.00001025826,0.2552448,0.000004634061,0.000004809577,0.000003270304,0.00004289664,0.000007552698,0.7441727,0.0001489968,0.000001125713,0.0003285148],"study_design_scores_gemma":[0.00005972225,0.00002698773,0.9956107,0.000007117019,0.000007946944,0.0000106537,0.00003219721,0.0001237309,0.002852005,0.001081869,0.0001246857,0.0000623599],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954269,0.00405492,0.0001273927,0.0001567354,0.00006103594,0.0001000836,0.00005439205,0.000004699141,0.00001386076],"genre_scores_gemma":[0.9993556,0.0004475455,0.00003698246,0.00005383171,0.00003707269,0.00001859538,0.00002886227,4.695094e-7,0.0000210783],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7413207,"threshold_uncertainty_score":0.1186311,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004863104094931616,"score_gpt":0.194433442694456,"score_spread":0.1895703385995244,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}