{"id":"W2097758894","doi":"10.1186/gb-2009-10-10-r106","title":"Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions","year":2009,"lang":"en","type":"article","venue":"Genome biology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Canadian Institutes of Health Research; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fonds Québécois de la Recherche sur la Nature et les Technologies; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Génome Québec; Canadian Institute for Advanced Research; Michael Smith Health Research BC; National Science Foundation","keywords":"Biology; Genome; Genetics; Gene; Human genetics; Parasite hosting; Daphnia; Whole genome sequencing; Host (biology); GC-content; Genomics; Computational biology; Evolutionary biology; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006766346,0.001164176,0.001239733,0.001712748,0.0008054947,0.001467647,0.0007566928,0.0009188207,0.005251254],"category_scores_gemma":[0.001504252,0.0007532731,0.001141168,0.003249577,0.0002501014,0.0007016978,0.0005930213,0.00159705,0.003444634],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00105508,"about_ca_system_score_gemma":0.002629886,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01039284,"about_ca_topic_score_gemma":0.01392646,"domain_scores_codex":[0.999689,0.00002842342,0.00002853371,0.0001360136,0.0000841462,0.00003392542],"domain_scores_gemma":[0.9990399,0.0002070888,0.0002483177,0.00005328211,0.0002589252,0.0001924703],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002691956,0.0001937786,0.0194471,0.008905416,0.0006046161,0.001847877,0.001369842,0.004469202,0.8679137,0.001055917,0.03219453,0.05930609],"study_design_scores_gemma":[0.0008786833,0.001221423,0.5005974,0.001745209,0.003491305,0.004211619,0.001931288,0.02670695,0.09498265,0.003514619,0.360365,0.0003537995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.3009246,0.008903291,0.0474944,0.001332149,0.0005213701,0.0003696253,0.6303519,0.005575425,0.004527187],"genre_scores_gemma":[0.1227182,0.004220544,0.09082415,0.000295357,0.0001196927,0.0003193783,0.7767635,0.001339617,0.003399537],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01039284,"threshold_uncertainty_score":0.02066469,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01791919668897496,"score_gpt":0.2735552952280527,"score_spread":0.2556360985390777,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}