{"id":"W2097946039","doi":"10.1128/jb.01224-06","title":"Glycosylation of <i>Pseudomonas aeruginosa</i> Strain Pa5196 Type IV Pilins with Mycobacterium-Like α-1,5-Linked <scp>d</scp> -Ara <i>f</i> Oligosaccharides","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; University of Toronto; Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Colorado State University","keywords":"Biology; Pilin; Microbiology; Pilus; Lipoarabinomannan; Glycan; Mycobacterium; Bacterial adhesin; Glycosylation; Mycobacterium tuberculosis; Bacteria; Virulence; Biochemistry; Glycoprotein; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008559231,0.0004290508,0.0001455532,0.0001395059,0.0001278122,0.0002562152,0.0001803527,0.000222634,0.0003992842],"category_scores_gemma":[0.0002539302,0.0001308661,0.0002680756,0.0001701884,0.0001614568,0.0001715889,0.0002035704,0.0003496962,0.0001534643],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001999277,"about_ca_system_score_gemma":0.0001061873,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009227919,"about_ca_topic_score_gemma":0.0005508507,"domain_scores_codex":[0.9998819,0.00002184014,0.00001109068,0.00002316088,0.00003181661,0.00003021808],"domain_scores_gemma":[0.9998349,0.00002532497,0.00006045531,0.00003004818,0.00001836208,0.00003086354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000409764,0.00000837995,0.0004742786,0.000007191729,0.000002928506,0.00004706434,0.000008715414,0.00001869293,0.9990888,0.00001211648,0.000006318626,0.0002846211],"study_design_scores_gemma":[0.000007060716,0.0002402116,0.02905465,0.000005546133,0.00002005448,0.000665768,0.00006652431,0.0006038827,0.9686379,0.00003139989,0.0006607848,0.0000061966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992443,0.00007679407,0.0003143303,0.00002082873,0.000003073292,0.000004457215,0.00007064745,0.000007024411,0.0002584523],"genre_scores_gemma":[0.9980918,0.00009485568,0.0008644157,0.000026298,0.00000349279,0.000006764676,0.0003880785,0.000009428411,0.0005149358],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009227919,"threshold_uncertainty_score":0.001834869,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007427442662156539,"score_gpt":0.2125877844803405,"score_spread":0.2051603418181839,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}