{"id":"W2098068164","doi":"10.1038/ncomms5051","title":"2q36.3 is associated with prognosis for oestrogen receptor-negative breast cancer patients treated with chemotherapy","year":2014,"lang":"en","type":"article","venue":"Nature Communications","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"David Geffen School of Medicine, University of California, Los Angeles; National Cancer Institute; Medisinske fakultet, Universitetet i Oslo; Institute of Biomedical Sciences, Academia Sinica; Medical Research Council; University of California, San Francisco; National Institutes of Health; Akershus Universitetssykehus; Fakultet Medicinskih Nauka, Univerziteta U Kragujevcu; Changhua Christian Hospital; China Medical University; QIMR Berghofer Medical Research Institute; Norges Forskningsråd; Universitetet i Oslo; National Breast Cancer Foundation; Seoul National University; Genome Institute of Singapore; Leids Universitair Medisch Centrum; National Health and Medical Research Council; Oulun Yliopisto; Universiti Malaya; Vetenskapsrådet; St Vincent's Hospital Melbourne; Academia Sinica; Kuopion Yliopistollinen Sairaala; Karolinska Institutet; Bundesministerium für Bildung und Forschung; Ovarian Cancer Research Fund; Ministerio de Economía y Competitividad; Kementerian Sains, Teknologi dan Inovasi; Deutsche Krebshilfe; University of Toronto; King's College London; Academy of Finland; Cancer Council Victoria; University of Melbourne; Stockholms Läns Landsting; National Science Council; Ministério da Ciência, Tecnologia e Inovação; Universiteit Leiden; Cancer Australia; Cancer Research Institute; Agency for Science, Technology and Research; KWF Kankerbestrijding; University of Southern California; National University of Singapore; Cancer Research UK; Canadian Institutes of Health Research; University of Southampton; Biocenter, University of Oulu; National Institute for Health and Care Research; University Hospital Southampton NHS Foundation Trust; Deutsches Krebsforschungszentrum; Helsingin ja Uudenmaan Sairaanhoitopiiri; Breast Cancer Research Foundation; University of Cambridge; College of Medicine, Seoul National University; Susan G. Komen for the Cure; Taiwan Biobank; Itä-Suomen Yliopisto; Breast Cancer Campaign; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; Helsingin Yliopisto; Erasmus Universitair Medisch Centrum Rotterdam; European Commission; Cancerfonden","keywords":"Breast cancer; Medicine; Oncology; Single-nucleotide polymorphism; Hazard ratio; Internal medicine; Cancer; Genotyping; Population; Genome-wide association study; Biology; Genotype; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002769645,0.0002306272,0.0002522485,0.0003920341,0.0002586251,0.0003211146,0.0002418336,0.00046471,0.003863793],"category_scores_gemma":[0.001801744,0.0001072767,0.0005036372,0.0006459062,0.0001987288,0.0001149613,0.0001869212,0.0003411399,0.0002823871],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000156997,"about_ca_system_score_gemma":0.0001346048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00194052,"about_ca_topic_score_gemma":0.00192629,"domain_scores_codex":[0.9997959,0.00005706065,0.00001956591,0.00006751833,0.00002980508,0.0000302143],"domain_scores_gemma":[0.9989225,0.0002352906,0.0006198201,0.0000671307,0.00004584447,0.0001095187],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001404312,0.00003862522,0.9861859,0.00002784911,0.0002308203,0.0006075036,0.00008290779,0.000195679,0.005655414,0.00006724432,0.0005371264,0.004966658],"study_design_scores_gemma":[0.00004435175,0.0000938743,0.9974779,0.000008084538,0.0001117701,0.001034723,0.00003426845,0.000294621,0.0003291553,0.000101775,0.0004644516,0.000005014033],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981596,0.0005578566,0.0001843447,0.0001949991,0.00002030632,0.000005599046,0.0003813136,0.00001348175,0.000482541],"genre_scores_gemma":[0.9993898,0.00009352178,0.00007207098,0.0000334261,0.00001718921,0.000004479367,0.0001909435,0.000003486616,0.0001951797],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003863793,"threshold_uncertainty_score":0.01292562,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01294213781904713,"score_gpt":0.2871066166888206,"score_spread":0.2741644788697735,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). 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