{"id":"W2098917052","doi":"10.1093/nar/gkt279","title":"A novel cis -acting element from the 3′UTR of DNA damage-binding protein 2 mRNA links transcriptional and post-transcriptional regulation of gene expression","year":2013,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University; University of Ottawa; Children's Hospital of Eastern Ontario; Ottawa Hospital","funders":"Canadian Institutes of Health Research; Ottawa Hospital Research Institute","keywords":"Biology; Nucleotide excision repair; Untranslated region; Messenger RNA; DNA repair; Post-transcriptional regulation; Molecular biology; Three prime untranslated region; Reporter gene; Five prime untranslated region; AU-rich element; Gene expression; Cell biology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002235269,0.0004402127,0.0003699513,0.000219945,0.0002470552,0.0002814222,0.0002403604,0.0003679117,0.0009070513],"category_scores_gemma":[0.0003084716,0.0003367587,0.0003880115,0.0001304188,0.0003901275,0.0001566447,0.0003210204,0.0006749401,0.0004423694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004445513,"about_ca_system_score_gemma":0.0003908892,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000314171,"about_ca_topic_score_gemma":0.0009508378,"domain_scores_codex":[0.999698,0.00004947188,0.00002533782,0.0001165784,0.00007796576,0.00003263331],"domain_scores_gemma":[0.999787,0.00005687255,0.00005631755,0.00002955285,0.00002737857,0.0000428066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004595126,0.00001031342,0.0001207018,0.00001874145,0.000001658606,0.00007409488,0.00001345568,0.00004639569,0.998665,0.0001769972,0.00002114995,0.0008054502],"study_design_scores_gemma":[0.00001770553,0.0002014462,0.004124257,0.00001107658,0.000009900024,0.0005335259,0.00001596239,0.001141796,0.9907786,0.0001190099,0.003038361,0.000008376152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9501253,0.002700141,0.04336232,0.0003023214,0.0001510167,0.0001374714,0.0006619461,0.0005053746,0.002054104],"genre_scores_gemma":[0.9647782,0.0004789535,0.03069451,0.0001965711,0.00004176443,0.0001103597,0.001227002,0.00006236338,0.002410273],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009070513,"threshold_uncertainty_score":0.003225446,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03437452098402921,"score_gpt":0.2998838417631037,"score_spread":0.2655093207790745,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}