{"id":"W2099214157","doi":"10.1089/108729001753231713","title":"CpG Motif Identification for Veterinary and Laboratory Species Demonstrates That Sequence Recognition Is Highly Conserved","year":2001,"lang":"en","type":"article","venue":"Antisense and Nucleic Acid Drug Development","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":234,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Immunostimulant; CpG Oligodeoxynucleotide; CpG site; Computational biology; Immune system; Conserved sequence; In vitro; DNA sequencing; Sequence motif; DNA; Immunology; Genetics; Gene; Base sequence; DNA methylation; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004472839,0.0004329215,0.0003309806,0.0006090146,0.0002627712,0.0002312325,0.0002241613,0.0005399702,0.003043776],"category_scores_gemma":[0.0007458242,0.0001570755,0.0002779263,0.0003009255,0.0002778041,0.000178678,0.000278842,0.0004553381,0.0009571129],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001827435,"about_ca_system_score_gemma":0.000390424,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002961521,"about_ca_topic_score_gemma":0.00123538,"domain_scores_codex":[0.9996706,0.00006695461,0.00004796828,0.0000809567,0.00007988772,0.00005364482],"domain_scores_gemma":[0.9993792,0.0001584146,0.0002027716,0.00007858397,0.0001030525,0.00007799266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007536173,0.00002515118,0.0006611328,0.00008338633,0.000005782316,0.0000255665,0.00001306321,0.00005012476,0.9924563,0.00007457934,0.00003346016,0.006496055],"study_design_scores_gemma":[0.00001337436,0.001336383,0.007102218,0.00002608706,0.00003811351,0.001075443,0.0000330545,0.0004345583,0.983519,0.0001195853,0.006288898,0.00001325398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9553515,0.003427711,0.03595497,0.0001739888,0.00005757043,0.0002530774,0.0008211954,0.000230842,0.003729163],"genre_scores_gemma":[0.9352756,0.002044092,0.05816581,0.0001512016,0.00002573973,0.0001860787,0.001934753,0.00006853919,0.002148188],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003043776,"threshold_uncertainty_score":0.01018244,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04572298829093271,"score_gpt":0.2480118923916766,"score_spread":0.2022889041007439,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}