{"id":"W2099530092","doi":"10.1101/gr.106666.110","title":"Genomic signatures of germline gene expression","year":2010,"lang":"en","type":"article","venue":"Genome Research","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Howard Hughes Medical Institute","keywords":"Biology; Germline; Genetics; Transposable element; Gene; Germline mutation; Gene expression; Allele; Point mutation; Genome; Transcription (linguistics); Mutant; Mutation","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000147514,0.00008807192,0.000192405,0.0006493667,0.0000956649,0.0002453449,0.00009587395,0.0001583062,0.0008854767],"category_scores_gemma":[0.0007347497,0.00008827514,0.0001292498,0.0005978263,0.0002245294,0.0001130854,0.0001871643,0.00020233,0.0001576189],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001097206,"about_ca_system_score_gemma":0.00008966951,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003850873,"about_ca_topic_score_gemma":0.0007545052,"domain_scores_codex":[0.999785,0.00002793278,0.00001118013,0.0001083738,0.0000386656,0.00002889792],"domain_scores_gemma":[0.999371,0.000241457,0.00021363,0.00005505991,0.00005838202,0.00006048832],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003573618,0.00002439627,0.2938279,0.00007561177,0.0001007169,0.0002179286,0.0002021312,0.0003567625,0.6920539,0.0004864933,0.000093225,0.01220356],"study_design_scores_gemma":[0.000006358895,0.0000885831,0.9793931,0.000003790336,0.00002915222,0.0005884062,0.00006878159,0.000621253,0.01836576,0.0003855848,0.0004425014,0.000006663886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982262,0.0001638041,0.0006511021,0.00001811588,0.000001118607,0.000002092378,0.0005635168,0.00001638288,0.0003576977],"genre_scores_gemma":[0.9985458,0.00006243568,0.000589794,0.00001601063,0.000004019747,0.000004619747,0.0006203231,0.000006675652,0.0001503577],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008854767,"threshold_uncertainty_score":0.002962232,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04610863886768088,"score_gpt":0.305605002791693,"score_spread":0.2594963639240121,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}