{"id":"W2099563542","doi":"10.1093/nar/29.10.2191","title":"Analysis of intergenic spacer transcripts suggests 'read-around' transcription of the extrachromosomal circular rDNA in Euglena gracilis","year":2001,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Internal transcribed spacer; Extrachromosomal DNA; Genetics; Ribosomal RNA; Ribosomal Intergenic Spacer analysis; Spacer DNA; Primer extension; Transcription (linguistics); Euglena gracilis; Ribosomal DNA; Intron; Gene; Molecular biology; RNA; Genome; Phylogenetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008731304,0.000253838,0.00014604,0.0003694667,0.0001412063,0.0002223525,0.0001587685,0.0002573998,0.0005564823],"category_scores_gemma":[0.0002304087,0.0001222216,0.0002757101,0.0002778638,0.0001792598,0.0001517889,0.0001382634,0.0004223142,0.0003392189],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001888234,"about_ca_system_score_gemma":0.0001514319,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003542017,"about_ca_topic_score_gemma":0.0006397985,"domain_scores_codex":[0.9999295,0.000006702503,0.000004433392,0.00002510127,0.00002102737,0.00001330338],"domain_scores_gemma":[0.9997191,0.00006252705,0.0001313975,0.00002374889,0.00002866396,0.00003446206],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006072869,0.00000753185,0.0007288611,0.0000255627,0.000001893631,0.00005016517,0.00004251948,0.0000417565,0.9974806,0.00006257701,0.000007463636,0.001490356],"study_design_scores_gemma":[0.00002671964,0.0006010001,0.1210727,0.00002876902,0.0000472862,0.0006965615,0.0002090556,0.001483886,0.8722351,0.0004435188,0.003133369,0.00002190565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961268,0.0003493262,0.002504369,0.00003568728,0.000007608078,0.000008919871,0.0004402391,0.0000656987,0.0004613342],"genre_scores_gemma":[0.990827,0.0002672925,0.005295089,0.00007882575,0.000008830798,0.00001778857,0.002339558,0.00002931192,0.001136239],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005564823,"threshold_uncertainty_score":0.001861572,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03845664989428018,"score_gpt":0.3098596319690914,"score_spread":0.2714029820748113,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}