{"id":"W2099709378","doi":"10.1128/jb.00536-10","title":"Massive Gene Duplication Event among Clinical Isolates of the <i>Mycobacterium tuberculosis</i> W/Beijing Family","year":2010,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Gene duplication; Biology; Genetics; Mycobacterium tuberculosis; Gene; Lineage (genetic); Genome; Tandem exon duplication; Phenotype; Gene family; Homologous recombination; Segmental duplication; Tuberculosis; Computational biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001765748,0.00017729,0.0003101968,0.000570182,0.0003309371,0.0003986385,0.0002103718,0.0003524554,0.0005224643],"category_scores_gemma":[0.0008149861,0.0001680886,0.0002009279,0.000416728,0.0002980565,0.0001467497,0.0002806947,0.0003443834,0.0002205491],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002536212,"about_ca_system_score_gemma":0.0001288629,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001048616,"about_ca_topic_score_gemma":0.001029158,"domain_scores_codex":[0.9997045,0.0000427533,0.00004012464,0.0000917277,0.00005851317,0.00006231743],"domain_scores_gemma":[0.9996922,0.00007276792,0.00008808723,0.00004769507,0.00003297323,0.0000662895],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005051604,0.00007142772,0.195256,0.00008147085,0.0000558492,0.006982536,0.0006145908,0.0002041776,0.7875926,0.0001154442,0.0001546167,0.008366027],"study_design_scores_gemma":[0.00003397923,0.0006188704,0.8749486,0.00001851576,0.0001031154,0.03348681,0.0006061585,0.001068091,0.08642138,0.0001499463,0.002524263,0.00002033027],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993086,0.0001205946,0.0002091888,0.00002492662,0.00000165317,0.00001369586,0.00008140902,0.000007927856,0.000232039],"genre_scores_gemma":[0.9991335,0.00008887391,0.0003514691,0.00002576995,0.000005501016,0.000007539218,0.0002653546,0.000005070065,0.0001169309],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001048616,"threshold_uncertainty_score":0.00208503,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02430075980868561,"score_gpt":0.3390592544814726,"score_spread":0.314758494672787,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}