{"id":"W2099815913","doi":"10.1039/b822669e","title":"Rapid identification of Burkholderia cepacia complex species including strains of the novel Taxon K, recovered from cystic fibrosis patients by intact cell MALDI-ToF mass spectrometry","year":2009,"lang":"en","type":"article","venue":"The Analyst","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Consejo Nacional de Investigaciones Científicas y Técnicas; Cystic Fibrosis Foundation","keywords":"Cystic fibrosis; Burkholderia cepacia complex; Mass spectrometry; Microbiology; Burkholderia; Taxon; Identification (biology); Biology; Chemistry; Bacteria; Chromatography; Botany; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004364837,0.0004717143,0.0003930441,0.0008251081,0.0001674586,0.0004708973,0.0001696329,0.0004044639,0.0002349469],"category_scores_gemma":[0.000953361,0.0001429205,0.0001773066,0.0003527844,0.0002205599,0.0002806245,0.0002978099,0.0002494612,0.0002155429],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008884382,"about_ca_system_score_gemma":0.0001240766,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003393963,"about_ca_topic_score_gemma":0.0004339319,"domain_scores_codex":[0.9995288,0.000102918,0.00005339163,0.0001377311,0.0001383862,0.00003892181],"domain_scores_gemma":[0.9996272,0.0001109716,0.0001160484,0.00002727857,0.0000784275,0.00004002558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000324912,0.00007743737,0.01950411,0.00008595905,0.00001603913,0.000159973,0.0001041658,0.000110358,0.9645514,0.00001295836,0.00002376725,0.01502893],"study_design_scores_gemma":[0.00004800789,0.002523607,0.3015737,0.00004620662,0.0001737992,0.006251834,0.0005461369,0.006729105,0.6795765,0.00009085301,0.00239125,0.00004911909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9902285,0.001753115,0.007367,0.00004318963,0.000009504818,0.00006353897,0.0002736925,0.00004713847,0.0002142223],"genre_scores_gemma":[0.976589,0.0007222141,0.02199715,0.00003735592,0.00001204293,0.00003289463,0.000426674,0.0000107787,0.0001719789],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008251081,"threshold_uncertainty_score":0.002308369,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02828839474732327,"score_gpt":0.2463308849145724,"score_spread":0.2180424901672491,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}