{"id":"W2100137276","doi":"10.1139/gen-2014-0075","title":"Phylogenetic analysis of the genus<i>Avena</i>based on chloroplast intergenic spacer<i>psb</i>A–<i>trn</i>H and single-copy nuclear gene<i>Acc1</i>","year":2014,"lang":"en","type":"article","venue":"Genome","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Hong Kong Institute of Education; National Natural Science Foundation of China; Innovative Research Group Project of the National Natural Science Foundation of China","keywords":"Biology; Genome; Ploidy; Phylogenetic tree; Genetics; Intergenic region; Polyploid; Avena; Maximum parsimony; Phylogenetics; Genus; Gene; Evolutionary biology; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002151645,0.0003050882,0.0002946671,0.001447593,0.000714319,0.0004244474,0.0002555506,0.0002267351,0.0007291419],"category_scores_gemma":[0.0003847809,0.0001347262,0.000355603,0.0009769218,0.0002661684,0.0002083572,0.0002687223,0.0003454748,0.0002812074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005543259,"about_ca_system_score_gemma":0.0003734809,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003391414,"about_ca_topic_score_gemma":0.005171591,"domain_scores_codex":[0.9998282,0.0000390492,0.00001455656,0.00006612809,0.00002390045,0.00002812567],"domain_scores_gemma":[0.9997806,0.00005100285,0.00006651626,0.00002315429,0.00003274606,0.00004594385],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006180719,0.00008398421,0.1812439,0.0003000082,0.0002300655,0.0004958978,0.001131145,0.001426745,0.7763398,0.0006955239,0.0003460306,0.03708886],"study_design_scores_gemma":[0.00004066884,0.0003404927,0.9702368,0.00009264862,0.0001732486,0.00119473,0.0006169187,0.005076288,0.008921131,0.0005749572,0.01269427,0.00003782538],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961432,0.0006723818,0.001299923,0.00002986358,0.000006668862,0.00002378082,0.0005242671,0.0000343343,0.001265576],"genre_scores_gemma":[0.9900278,0.0003201495,0.005826109,0.00004189419,0.000008339503,0.00002742242,0.003229235,0.00001924827,0.000499701],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003391414,"threshold_uncertainty_score":0.006743371,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006884192429212759,"score_gpt":0.1868231348063864,"score_spread":0.1799389423771736,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}