{"id":"W2100337490","doi":"10.1111/j.1365-2761.2012.01391.x","title":"Phylogenetic analysis and molecular methods for the detection of lymphocystis disease virus from yellow perch, <i>Perca flavescens</i> (Mitchell)","year":2012,"lang":"en","type":"article","venue":"Journal of Fish Diseases","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Prince Edward Island","funders":"Natural Sciences and Engineering Research Council of Canada; Syncrude; Suncor Energy Incorporated; Canadian Natural Resources Limited","keywords":"Perch; Biology; Virology; Virus; Phylogenetic tree; Capsid; Genotype; Gene; Spleen; Genetics; Fish <Actinopterygii>; Fishery; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002538354,0.000189598,0.0004057884,0.0001649834,0.0001423249,0.00002476816,0.0002291075,0.00008947247,0.0001196383],"category_scores_gemma":[0.0002275288,0.0001285634,0.000592622,0.0002547737,0.0001992165,0.0001249809,0.00007098672,0.0001002318,0.00000373659],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003439956,"about_ca_system_score_gemma":0.00004487363,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000481642,"about_ca_topic_score_gemma":0.00001323422,"domain_scores_codex":[0.9988345,0.0002887991,0.0003993339,0.0001650278,0.00005525777,0.0002571041],"domain_scores_gemma":[0.9987417,0.0003667744,0.0003660457,0.0002472513,0.0001521979,0.0001260686],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008261704,0.0002907744,0.009237569,0.00005295558,0.003803113,0.000004162547,0.0002445732,0.00002420604,0.9550404,0.00001200145,0.001475859,0.02898825],"study_design_scores_gemma":[0.003135566,0.0001993631,0.5344852,0.00007333082,0.03835072,0.00001751157,0.0009257966,0.00008913068,0.3649349,0.0002678378,0.05706703,0.000453663],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8534377,0.1008791,0.04378626,0.0002984434,0.0005164904,0.0003475673,0.0007053855,0.00001315692,0.00001580891],"genre_scores_gemma":[0.9970805,0.00141811,0.0006418565,0.0005446463,0.0001112684,0.00001251833,0.00007531891,0.00001636514,0.00009940615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5901055,"threshold_uncertainty_score":0.5242665,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008931573695096796,"score_gpt":0.2681164741189743,"score_spread":0.2591849004238775,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}