{"id":"W2100555030","doi":"10.1186/s12915-015-0191-8","title":"Mechanisms of blood homeostasis: lineage tracking and a neutral model of cell populations in rhesus macaques","year":2015,"lang":"en","type":"article","venue":"BMC Biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Kavli Institute for Theoretical Physics, University of California, Santa Barbara; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Army Research Office; Center for AIDS Research, University of Washington; National Science Foundation; National Institutes of Health; University of California, Los Angeles; California Institute of Regenerative Medicine; University of California, Santa Barbara","keywords":"Biology; clone (Java method); Lineage (genetic); Haematopoiesis; Population; Stem cell; Progenitor cell; Evolutionary biology; Genetics; Cell biology; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001350098,0.0004507425,0.0006543084,0.0008750482,0.0006330262,0.001095887,0.001718574,0.001274037,0.001472553],"category_scores_gemma":[0.003681774,0.0003123754,0.000901396,0.0004335958,0.001870926,0.001357489,0.001154122,0.0007957955,0.0002889914],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002237334,"about_ca_system_score_gemma":0.0009159026,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007943632,"about_ca_topic_score_gemma":0.002791496,"domain_scores_codex":[0.999645,0.0001023815,0.00001309881,0.0001158411,0.00007067867,0.00005299149],"domain_scores_gemma":[0.9989783,0.0004438194,0.0003021657,0.0000666432,0.0001114547,0.00009770734],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"observational","study_design_scores_codex":[0.00008599737,0.00007951273,0.009680009,0.0001453691,0.0000768273,0.0005052173,0.0007535667,0.7114342,0.04063453,0.2284741,0.0008835073,0.007247122],"study_design_scores_gemma":[0.00000896351,0.00004626011,0.001331114,0.00000946339,0.0000213853,0.0001544849,0.00006326849,0.9785554,0.0009981653,0.01797805,0.0008158088,0.00001747696],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5969774,0.001115159,0.3890582,0.001762436,0.00007405705,0.00008803756,0.0003373896,0.0002019476,0.01038545],"genre_scores_gemma":[0.9765201,0.0005317732,0.01608783,0.0002687063,0.00004259822,0.0001600759,0.0001052385,0.00005492877,0.006228892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007943632,"threshold_uncertainty_score":0.01623309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1325973632894308,"score_gpt":0.3314812859197097,"score_spread":0.1988839226302788,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}