{"id":"W2100599803","doi":"10.17269/cjph.104.3830","title":"The Power and Pitfalls of HIV Phylogenetics in Public Health","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Phylogenetics; Public health; Sine qua non; Epidemiology; Data science; Context (archaeology); Population; Disease; Evolutionary biology; Biology; Medicine; Genetics; Computer science; Environmental health; Political science; Pathology; Paleontology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.2609071,0.0008880583,0.001940705,0.006663636,0.008406599,0.007242844,0.00435233,0.005376519,0.004752835],"category_scores_gemma":[0.4243674,0.00128314,0.0007937869,0.005326968,0.0406596,0.03004842,0.008999923,0.01000823,0.0004927405],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005009759,"about_ca_system_score_gemma":0.01041391,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02836198,"about_ca_topic_score_gemma":0.04209418,"domain_scores_codex":[0.8579679,0.1244103,0.002760346,0.003002909,0.01010165,0.001756847],"domain_scores_gemma":[0.4435542,0.499824,0.01463159,0.0180904,0.01866748,0.005232428],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0007830187,0.0001626104,0.1268147,0.002112301,0.0008642556,0.0005465927,0.02571705,0.003860476,0.0003162908,0.4096216,0.03086828,0.3983328],"study_design_scores_gemma":[0.0001845509,0.0004296299,0.04071128,0.006105727,0.0005034992,0.001312322,0.03062393,0.009448775,0.000727847,0.8287678,0.08094154,0.0002431511],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"commentary","genre_gemma":"review","genre_scores_codex":[0.09546506,0.1386988,0.04036439,0.6834683,0.006256056,0.0001592093,0.0008786813,0.0001272343,0.03458227],"genre_scores_gemma":[0.9117786,0.02601145,0.02104198,0.03202743,0.007742426,0.0001842959,0.00009988441,0.00008806702,0.001025979],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.2609071,"threshold_uncertainty_score":0.9114332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1300949219539161,"score_gpt":0.3700313280614592,"score_spread":0.239936406107543,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}