{"id":"W2100797944","doi":"10.1104/pp.111.184275","title":"HDA6 Directly Interacts with DNA Methyltransferase MET1 and Maintains Transposable Element Silencing in Arabidopsis  ","year":2011,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":177,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Histone methyltransferase; Histone methylation; Epigenomics; Epigenetics of physical exercise; DNA methylation; Biology; Histone; Methylation; Molecular biology; RNA-Directed DNA Methylation; Histone H4; H3K4me3; Histone H2A; Genetics; DNA; Promoter; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002525257,0.0001749419,0.000293822,0.00003773206,0.00007769599,0.00001007837,0.000207672,0.0001021524,0.0002682175],"category_scores_gemma":[0.00002061622,0.00006710993,0.00003776536,0.0001918983,0.0001168266,0.00007221684,0.00003934122,0.0002130277,0.00001461516],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002046023,"about_ca_system_score_gemma":0.00001198277,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001098429,"about_ca_topic_score_gemma":0.006285746,"domain_scores_codex":[0.9985462,0.0002549512,0.0001897404,0.0004232459,0.00009575932,0.0004901251],"domain_scores_gemma":[0.9995036,0.00027094,0.00003665429,0.00006070021,0.00002254193,0.0001056039],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005076291,0.0001093048,0.008694248,0.000009272601,0.00004458565,0.00009081087,0.0003219436,0.000002055427,0.9879635,0.0001633885,0.00001926493,0.002074013],"study_design_scores_gemma":[0.0005442846,0.001353522,0.4365715,0.00006606508,0.00002939203,0.0001075631,0.0005201161,0.0001326218,0.5592013,0.0006378063,0.000477248,0.0003585672],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985945,0.0000972403,0.000006236468,0.0001909769,0.000028963,0.0002420542,0.0001617306,0.00003089721,0.0006474536],"genre_scores_gemma":[0.9991046,0.0001970282,0.0001730727,0.0002145866,0.0000285695,0.00004318712,0.0002151204,0.000001486042,0.00002235734],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4287622,"threshold_uncertainty_score":0.3507594,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02569419762290919,"score_gpt":0.2192184843113103,"score_spread":0.1935242866884011,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}